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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005815000
- symbol?: —
- synonym:
- description?: N-acetyl-L,L-diaminopimelate deacetylase
- N-acetyl-L,L-diaminopimelate deacetylase
- M20/M25/M40 family peptidase
- amidohydrolase
- aminoacylase, putative
- peptidase M20/M25/M40 family protein
- amidohydrolase family protein
- amidohydrolase subfamily
- amino acid amidohydrolase
- hippurate hydrolase
- M20D subfamily peptidase
- N-acetyl-L,L-diaminopimelate deacetylase-like protein
- N-acyl-L-amino acid amidohydrolase
- peptidase, aminoacylase
- pseudogene
- putative peptidase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5897698..5898819
- synteny block?: BlockID0045600
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2268
08BA02176:
C248_2372
11819-97:
MS7_2347
6850:
RSAU_002165
71193:
ST398NM01_2381
ECT-R 2:
ECTR2_2189
ED133:
SAOV_2369c
ED98:
SAAV_2393
HO 5096 0412:
SAEMRSA15_22270
JH1:
SaurJH1_2397
JH9:
SaurJH9_2354
JKD6008:
SAA6008_02366
JKD6159:
SAA6159_02233
LGA251:
SARLGA251_21120
M013:
M013TW_2287
MRSA252:
SAR2414
MSHR1132:
SAMSHR1132_21540
MSSA476:
SAS2222
Mu3:
SAHV_2313
Mu50:
SAV2329
MW2:
MW2250
RF122:
SAB2206c
ST398:
SAPIG2381
T0131:
SAT0131_02513
TCH60:
HMPREF0772_10865 (hipO2)
TW20:
SATW20_24610
USA300_TCH1516:
USA300HOU_2309
VC40:
SAVC_10510
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MGLKDQAVTWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILDLPLATGLVAEVGQGLS
N315 MGLKDQAVTWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILDLPLMTGLVAEVGQGLS
NCTC8325 MGLKDQAVTWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILDLPLATGLVAEVGQGLS
Newman MGLKDQAVTWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILDLPLATGLVAEVGQGLS
USA300_FPR3757 MGLKDQAVTWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILDLPLATGLVAEVGQGLS
*********************************************** ************
COL CIAVRADIDALPIQELVEQDFKSENEGVMHACGHDIHMASILATAVKLKEIEGTLTGRVK
N315 CIAVRADIDALPIQELVEQDFKSENEGVMHACGHDIHMASILATAVKLKEIEGTLTGRVK
NCTC8325 CIAVRADIDALPIQELVEQDFKSENEGVMHACGHDIHMASILATAVKLKEIEGTLTGRVK
Newman CIAVRADIDALPIQELVEQDFKSENEGVMHACGHDIHMASILATAVKLKEIEGTLTGRVK
USA300_FPR3757 CIAVRADIDALPIQELVEQDFKSENEGVMHACGHDIHMASILATAVKLKEIEGTLTGRVK
************************************************************
COL FIFQSAEELGHGAFKIIETHALKDVQAVLGFHNDPSRSVGTFAIKTGAITSAVDRFEFHI
N315 FIFQPAEELGHGAFKIIETDALKDVQAVLGFHNDPSRSVGTFAIKTGAITSAVDRFEFHI
NCTC8325 FIFQSAEELGHGAFKIIETHALKDVQAVLGFHNDPSRSVGTFAIKTGAITSAVDRFEFHI
Newman FIFQSAEELGHGAFKIIETHALKDVQAVLGFHNDPSRSVGTFAIKTGAITSAVDRFEFHI
USA300_FPR3757 FIFQSAEELGHGAFKIIETHALKDVQAVLGFHNDPSRSVGTFAIKTGAITSAVDRFEFHI
****.**************.****************************************
COL KGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAFDEAVVTIGQISCGNTWNVIADH
N315 KGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAFDEAVVTIGQISCGNTWNVIADH
NCTC8325 KGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAFDEAVVTIGQISCGNTWNVIADH
Newman KGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAFDEAVVTIGQISCGNTWNVIADH
USA300_FPR3757 KGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAFDEAVVTIGQISCGNTWNVIADH
************************************************************
COL AYVQGTVRSFDPVVRKLVETRLQDIADGLAQAYNMKINLNYTHLPGAVMNDEALTHKAIA
N315 AYVQGTVRSFDPVVRKLVETRLQDIADGLAQAYNMKINLNYTHLPGAVMNDEALTHKAIA
NCTC8325 AYVQGTVRSFDPVVRKLVETRLQDIADGLAQAYNMKINLNYTHLPGAVMNDEALTHKAIA
Newman AYVQGTVRSFDPVVRKLVETRLQDIADGLAQAYNMKINLNYTHLPGAVMNDEALTHKAIA
USA300_FPR3757 AYVQGTVRSFDPVVRKLVETRLQDIADGLAQAYNMKINLNYTHLPGAVMNDEALTHKAIA
************************************************************
COL VAQHVGYKVEMMEQPLTIGEDFSGYSQHFPSVFALIGSHSEYDLHHPQYKPDERILEKVP
N315 VAQHVGYKVEMMEQPLTIGEDFSGYSQHFPSVFALIGSHSEYDLHHPQYKPDERILEKVP
NCTC8325 VAQHVGYKVGMMEQPLTIGEDFSGYSQHFPSVFALIGSHSEYDLHHPQYKPDERILEKVP
Newman VAQHVGYKVEMMEQPLTIGEDFSGYSQHFPSVFALIGSHSEYDLHHPQYKPDERILEKVP
USA300_FPR3757 VAQHVGYKVEMMEQPLTIGEDFSGYSQHFPSVFALIGSHSEYDLHHPQYKPDERILEKVP
********* **************************************************
COL EYFVEFVKRLLHE
N315 EYFVEFVKRLLHE
NCTC8325 EYFVEFVKRLLHE
Newman EYFVEFVKRLLHE
USA300_FPR3757 EYFVEFVKRLLHE
*************