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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005935000
- symbol?: —
- synonym:
- description?: formate/nitrite transporter
- formate/nitrite transporter
- formate/nitrite transporter family protein
- formate/nitrite transporter, putative
- FNT family formate-nitrite transporter
- formate-nitrite transporter
- putative nitrite transporter
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6002109..6002816
- synteny block?: BlockID0046790
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2340 (nirC)
08BA02176:
C248_2450
11819-97:
MS7_2418
6850:
RSAU_002241
71193:
ST398NM01_2456
ECT-R 2:
ECTR2_2262
ED133:
SAOV_2449c
ED98:
SAAV_2468
HO 5096 0412:
SAEMRSA15_23020
JH1:
SaurJH1_2475
JH9:
SaurJH9_2427
JKD6008:
SAA6008_02444
JKD6159:
SAA6159_02304
LGA251:
SARLGA251_21850
M013:
M013TW_2364
MRSA252:
SAR2493
MSHR1132:
SAMSHR1132_22310
MSSA476:
SAS2294
Mu3:
SAHV_2387
Mu50:
SAV2403
MW2:
MW2325
RF122:
SAB2283c
ST398:
SAPIG2456
T0131:
SAT0131_02594
TCH60:
HMPREF0772_10784
TW20:
SATW20_25330
USA300_TCH1516:
USA300HOU_2385
VC40:
SAVC_10885
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIENKKTVEDTYSTGAIVDSISSSVQMKQVMVQQTPGRYMLKAMMAGFLLSIVTVFMFGI
N315 MIENKKTVEDTYSTGAIVDSISSSVQMKQVMVQQTPGRYMLKAMMAGFLLSIVTVFMFGI
NCTC8325 MIENKKTVEDTYSTGAIVDSISSSVQMKQVMVQQTPGRYMLKAMMAGFLLSIVTVFMFGI
Newman MIENKKTVEDTYSTGAIVDSISSSVQMKQVMVQQTPGRYMLKAMMAGFLLSIVTVFMFGI
USA300_FPR3757 MIENKKTVEDTYSTGAIVDSISSSVQMKQVMVQQTPGRYMLKAMMAGFLLSIVTVFMFGI
************************************************************
COL KTQFASTHVDGLINLMGAIAFSLGLILVVLTNSELLTSNFMYFTVGWYYKVVSVKKMTWI
N315 KTQFANTHVDGLINLMGAIAFSLGLILVVLTNSELLTSNFMYFTVGWYYKVVSVKKMTWI
NCTC8325 KTQFASTHVDGLINLMGAIAFSLGLILVVLTNSELLTSNFMYFTVGWYYKVVSVKKMTWI
Newman KTQFASTHVDGLINLMGAIAFSLGLILVVLTNSELLTSNFMYFTVGWYYKVVSVKKMTWI
USA300_FPR3757 KTQFASTHVDGLINLMGAIAFSLGLILVVLTNSELLTSNFMYFTVGWYYKVVSVKKMTWI
*****.******************************************************
COL LLYCFLGNILGGFVLFFLMKFAHVMTPEMTQALTALVQKKTVDSTWLNIFTKGIFCNFFI
N315 LLYCFLGNILGGFVLFFLMKFAHVMTPEMTQALTALVQKKTVDSTWLNIFTKGIFCNFFI
NCTC8325 LLYCFLGNILGGFVLFFLMKFAHVMTPEMTQALTALVQKKTVDSTWLNIFTKGIFCNFFI
Newman LLYCFLGNILGGFVLFFLMKFAHVMTPEMTQALTALVQKKTVDSTWLNIFTKGIFCNFFI
USA300_FPR3757 LLYCFLGNILGGFVLFFLMKFAHVMTPEMTQALTALVQKKTVDSTWLNIFTKGIFCNFFI
************************************************************
COL NIGIFISMQFKGGLTKAFFIACGVVVFVYMGYEHVVFNAGLYAGMVFFNLDAVSWLHVLK
N315 NIGIFISMQFKGGLTKAFFIACGVVVFVYMGYEHVVFNAGLYAGMVFFNLDAVSWLHVLK
NCTC8325 NIGIFISMQFKGGLTKAFFIACGVVVFVYMGYEHVVFNAGLYAGMVFFNLDAVSWLHVLK
Newman NIGIFISMQFKGGLTKAFFIACGVVVFVYMGYEHVVFNAGLYAGMVFFNLDAVSWLHVLK
USA300_FPR3757 NIGIFISMQFKGGLTKAFFIACGVVVFVYMGYEHVVFNAGLYAGMVFFNLDAVSWLHVLK
************************************************************
COL NIVFAFLGNFVGGGIFVGLVYAFLNGKRNRLEQQ
N315 NIVFAFLGNFVGGGIFVGLVYAFLNGKRNRLEQQ
NCTC8325 NIVFAFLGNFVGGGIFVGLVYAFLNGKRNRLEQQ
Newman NIVFAFLGNFVGGGIFVGLVYAFLNGKRNRLEQQ
USA300_FPR3757 NIVFAFLGNFVGGGIFVGLVYAFLNGKRNRLEQQ
**********************************