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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005955000
- symbol?: sbi
- synonym:
- description?: immunoglobulin-binding protein sbi
- immunoglobulin-binding protein sbi
- IgG-binding protein SBI
- immunoglobulin G-binding protein Sbi
- B domain protein
- Ig-binding B domain-containing protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6017605..6018918
- synteny block?: BlockID0046990
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2355 (sbi)
08BA02176:
C248_2465 (sbi)
11819-97:
MS7_2433 (sbi)
6850:
RSAU_002257 (sbi)
71193:
ST398NM01_2470
ECT-R 2:
ECTR2_2277
ED133:
SAOV_2466
ED98:
SAAV_2484
HO 5096 0412:
SAEMRSA15_23170 (sbi)
JH1:
SaurJH1_2492
JH9:
SaurJH9_2444
JKD6008:
SAA6008_02459 (sbi)
JKD6159:
SAA6159_02319 (sbi)
LGA251:
SARLGA251_22000 (sbi)
M013:
M013TW_2379
MRSA252:
SAR2508 (sbi)
MSHR1132:
SAMSHR1132_22470
MSSA476:
SAS2309
Mu3:
SAHV_2402 (sbi)
Mu50:
SAV2418 (sbi)
MW2:
MW2341 (sbi)
RF122:
SAB2298 (sbi)
ST398:
SAPIG2470
T0131:
SAT0131_02610
TCH60:
HMPREF0772_10769 (sbi)
TW20:
SATW20_25480 (sbi)
USA300_TCH1516:
USA300HOU_2401
VC40:
SAVC_10965
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQNNYVTDQQKAFYQVLH
N315 MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQNNYVTDQQKAFYQVLH
NCTC8325 MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQNNYVTDQQKAFYQVLH
Newman MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQNNYVTDQQKAFYQVLH
USA300_FPR3757 MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQNNYVTDQQKAFYQVLH
************************************************************
COL LKGITEEQRNQYIKTLREHPERAQEVFSESLKDSKNPDRRVAQQNAFYNVLKNDNLTEQE
N315 LKGITEEQRNQYIKTLREHPERAQEVFSESLKDSKNPDRRVAQQNAFYNVLKNDNLTEQE
NCTC8325 LKGITEEQRNQYIKTLREHPERAQEVFSESLKDSKNPDRRVAQQNAFYNVLKNDNLTEQE
Newman LKGITEEQRNQYIKTLREHPERAQEVFSESLKDSKNPDRRVAQQNAFYNVLKNDNLTEQE
USA300_FPR3757 LKGITEEQRNQYIKTLREHPERAQEVFSESLKDSKNPDRRVAQQNAFYNVLKNDNLTEQE
************************************************************
COL KNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKAIKDFQDNKAPHDKSAAYEAN
N315 KNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKAIKDFQDNKAPHDKSAAYEAN
NCTC8325 KNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKAIKDFQDNKAPHDKSAAYEAN
Newman KNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKAIKDFQDNKAPHDKSAAYEAN
USA300_FPR3757 KNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKAIKDFQDNKAPHDKSAAYEAN
************************************************************
COL SKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKA
N315 SKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKA
NCTC8325 SKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKA
Newman SKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKA
USA300_FPR3757 SKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKA
************************************************************
COL PMDVKEHLQKQLDALVAQKDAEKKVAPKVEAPQIQSPQIEKPKVESPKVEVPQIQSPKVE
N315 PMDVKEHLQKQLDALVAQKDAEKKVAPKVEAPQIQSPQIEKPKAESPKVEVPQIQSPKVE
NCTC8325 PMDVKEHLQKQLDALVAQKDAEKKVAPKVEAPQIQSPQIEKPKVESPKVEVPQIQSPKVE
Newman PMDVKEHLQKQLDALVAQKDAEKKVAPKVEAPQIQSPQIEKPKVESPKVEVPQIQSPKVE
USA300_FPR3757 PMDVKEHLQKQLDALVAQKDAEKKVAPKVEAPQIQSPQIEKPKVESPKVEVPQIQSPKVE
*******************************************.****************
COL VPQSKLLGYYQSLKDSFNYGYKYLTDTYKSYKEKYDTAKYYYNTYYKYKGAIDQTVLTVL
N315 VPQSKLLGYYQSLKDSFNYGYKYLTDTYKSYKEKYDTAKYYYNTYYKYKGAIDQTVLTVL
NCTC8325 VPQSKLLGYYQSLKDSFNYGYKYLTDTYKSYKEKYDTAKYYYNTYYKYKGAIDQTVLTVL
Newman VPQSKLLGYYQSLKDSFNYGYKYLTDTYKSYKEKYDTAKYYYNTYYKYKGAIDQTVLTVL
USA300_FPR3757 VPQSKLLGYYQSLKDSFNYGYKYLTDTYKSYKEKYDTAKYYYNTYYKYKGAIDQTVLTVL
************************************************************
COL GSGSKSYIQPLKVDDKNGYLAKSYAQVRNYVTESINTGKVLYTFYQNPTLVKTAIKAQET
N315 GSGSKSYIQPLKVDDKNGYLAKSYAQVRNYVTESINTGKVLYTFYQNPTLVKTAIKAQET
NCTC8325 GSGSKSYIQPLKVDDKNGYLAKSYAQVRNYVTESINTGKVLYTFYQNPTLVKTAIKAQET
Newman GSGSKSYIQPLKVDDKNGYLAKSYAQVRNYVTESINTGKVLYTFYQNPTLVKTAIKAQET
USA300_FPR3757 GSGSKSYIQPLKVDDKNGYLAKSYAQVRNYVTESINTGKVLYTFYQNPTLVKTAIKAQET
************************************************************
COL ASSIKNTLSNLLSFWK
N315 ASSIKNTLSNLLSFWK
NCTC8325 ASSIKNTLSNLLSFWK
Newman ASSIKNTLSNLLSFWK
USA300_FPR3757 ASSIKNTLSNLLSFWK
****************