Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005981000
- symbol?: —
- synonym:
- description?: membrane protein
- strand?: +
- coordinates?: 6042098..6042775
- synteny block?: BlockID0047250
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2370
08BA02176:
C248_2482
11819-97:
MS7_2447
6850:
RSAU_002273
71193:
ST398NM01_2485
ECT-R 2:
ECTR2_2291
ED133:
SAOV_2483
ED98:
SAAV_2499
HO 5096 0412:
SAEMRSA15_23330
JH1:
SaurJH1_2508
JH9:
SaurJH9_2459
JKD6008:
SAA6008_02474
JKD6159:
SAA6159_02331
LGA251:
SARLGA251_22140
M013:
M013TW_2396
MRSA252:
SAR2523
MSHR1132:
SAMSHR1132_22610
MSSA476:
SAS2325
Mu3:
SAHV_2417
Mu50:
SAV2433
MW2:
MW2357
RF122:
SAB2315
ST398:
SAPIG2485
T0131:
SAT0131_02628
TCH60:
HMPREF0772_10755
TW20:
SATW20_25620
USA300_TCH1516:
USA300HOU_2419
VC40:
SAVC_11040
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKRTDKYRDSYQYDNQNQNHRRQSEDASYRQQYAKGDPEEHPERYYNGRDYRREQILEEE
N315 MKRTDKYRDSYQYDNQNQNHRRQSEDASYRQQYAKGDPEEHPERYYNGRDYRREQILEEE
NCTC8325 MKRTDKYRDSYQYDNQNQNHRRQSEDASYRQQYAKGDPEEHPERYYNGRDYRREQILEEE
Newman MKRTDKYRDSYQYDNQNQNHRRQSEDASYRQQYAKGDPEEHPERYYNGRDYRREQILEEE
USA300_FPR3757 MKRTDKYRDSYQYDNQNQNHRRQSEDASYRQQYAKGDPEEHPERYYNGRDYRREQILEEE
************************************************************
COL NEKSRRSKKWLYIIIAILLIIVAIFVTRALLNNDSDKVSNDPKVSQNYKKQVENQDGQIN
N315 NEKSRRSKKWLYIIIAILLIIVAIFVTRALLNNDSDKVSNDPKVSQNYKKQVENQDGQIN
NCTC8325 NEKSRRSKKWLYIIIAILLIIVAIFVTRALLNNDSDKVSNDPKVSQNYKKQVENQDGQIN
Newman NEKSRRSKKWLYIIIAILLIIVAIFVTRALLNNDSDKVSNDPKVSQNYKKQVENQDGQIN
USA300_FPR3757 NEKSRRSKKWLYIIIAILLIIVAIFVTRALLNNDSDKVSNDPKVSQNYKKQVENQDGQIN
************************************************************
COL QQVDNAKENIKNNQKTDDIIKNLQNQIDNLKQQEQNKADSKLTQFYQDQINKLTEANNAL
N315 QQVDNAKENIKNNQKTDDIIKNLQNQIDNLKQQEQNKADSKLTQFYQDQINKLTEANNAL
NCTC8325 QQVDNAKENIKNNQKTDDIIKNLQNQIDNLKQQEQNKADSKLTQFYQDQINKLTEANNAL
Newman QQVDNAKENIKNNQKTDDIIKNLQNQIDNLKQQEQNKADSKLTQFYQDQINKLTEANNAL
USA300_FPR3757 QQVDNAKENIKNNQKTDDIIKNLQNQIDNLKQQEQNKADSKLTQFYQDQINKLTEANNAL
************************************************************
COL KNNASQGKIESMLNDINTKFDSIKSKLESLFKDDNGGAN
N315 KNNASQGKIESMLNDINTKFDSIKSKLESLFKDDNGGAN
NCTC8325 KNNASQGKIESMLNDINTKFDSIKSKLESLFKDDNGGAN
Newman KNNASQGKIESMLNDINTKFDSIKSKLESLFKDDNGGAN
USA300_FPR3757 KNNASQGKIESMLNDINTKFDSIKSKLESLFKDDNGGAN
***************************************