Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN006294000
- symbol?: panE
- synonym:
- description?: 2-dehydropantoate 2-reductase
- 2-dehydropantoate 2-reductase
- 2-dehydropantoate 2-reductase, putative
- oxidoreductase
- putative ketopantoate reductase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6342288..6343148
- synteny block?: BlockID0050100
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2538
08BA02176:
C248_2659
11819-97:
MS7_2605
6850:
RSAU_002441 (panE)
71193:
ST398NM01_2648
ECT-R 2:
ECTR2_2454 (panE)
ED133:
SAOV_2644
ED98:
SAAV_2666
HO 5096 0412:
SAEMRSA15_25030
JH1:
SaurJH1_2676
JH9:
SaurJH9_2622
JKD6008:
SAA6008_02657 (panE)
JKD6159:
SAA6159_02496 (panE)
LGA251:
SARLGA251_23730
M013:
M013TW_2577
MRSA252:
SAR2678
MSHR1132:
SAMSHR1132_24150
MSSA476:
SAS2485
Mu3:
SAHV_2584
Mu50:
SAV2600
MW2:
MW2519
RF122:
SAB2473
ST398:
SAPIG2648 (panE)
T0131:
SAT0131_02832 (hisZ)
TCH60:
HMPREF0772_10592 (panE)
TW20:
SATW20_27390
USA300_TCH1516:
USA300HOU_2594 (panE2)
VC40:
SAVC_11870
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTN
N315 MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTN
NCTC8325 MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTN
Newman MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTN
USA300_FPR3757 MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTN
************************************************************
COL TFDVIIIAVKTHQLDAVIPHLTHLAHEDTLIILAQNGYGQLEHISFKNVCQAVVYISGQK
N315 TFDVIIIAVKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLEHIPFKNVCQAVVYISGQK
NCTC8325 TFDVIIIAVKTHQLDAVIPHLTHLAHEDTLIILAQNGYGQLEHISFKNVCQAVVYISGQK
Newman TFDVIIIAVKTHQLDAVIPHLTHLAHEDTLIILAQNGYGQLEHISFKNVCQAVVYISGQK
USA300_FPR3757 TFDVIIIAVKTHQLDAVIPHLTHLAHEDTLIILAQNGYGQLEHISFKNVCQAVVYISGQK
**********************:*********************.***************
COL KGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITA
N315 KGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITA
NCTC8325 KGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITA
Newman KGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITA
USA300_FPR3757 KGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITA
************************************************************
COL LGRQTVAIMHNPEIRTLCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMY
N315 LGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMY
NCTC8325 LGRQTVAIMHNPEIRTLCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMY
Newman LGRQTVAIMHNPEIRTLCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMY
USA300_FPR3757 LGRQTVAIMHNPEIRTLCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMY
*************** ********************************************
COL YDIAHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM
N315 YDIVHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM
NCTC8325 YDIAHQQPLEVEAIQGFIYRRAREHILDTPYLDTIYSFLRAYQQNM
Newman YDIAHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM
USA300_FPR3757 YDIAHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM
***.********************* ********************