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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006297000
- symbol?: ldh2
- synonym:
- description?: L-lactate dehydrogenase
- L-lactate dehydrogenase
- L-lactate dehydrogenase 2
- L-lactate dehydrogenase Ldh2
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6344963..6345922
- synteny block?: BlockID0050130
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2540
08BA02176:
C248_2661 (ldh2)
11819-97:
MS7_2607
6850:
RSAU_002443 (ldh2)
71193:
ST398NM01_2650
ECT-R 2:
ECTR2_2456
ED133:
SAOV_2646c
ED98:
SAAV_2668 (ldh2)
HO 5096 0412:
SAEMRSA15_25060 (ldh2)
JH1:
SaurJH1_2678
JH9:
SaurJH9_2624
JKD6008:
SAA6008_02659 (ldh2)
JKD6159:
SAA6159_02498 (ldh2)
LGA251:
SARLGA251_23750 (ldh2)
M013:
M013TW_2579
MRSA252:
SAR2680 (ldh2)
MSHR1132:
SAMSHR1132_24170
MSSA476:
SAS2487
Mu3:
SAHV_2586
Mu50:
SAV2602
MW2:
MW2521
RF122:
SAB2475c (ldh)
ST398:
SAPIG2650
T0131:
SAT0131_02834 (acnA)
TCH60:
HMPREF0772_10590 (ldhB)
TW20:
SATW20_27410 (ldh2)
USA300_TCH1516:
—
VC40:
SAVC_11880
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVKADVQDLNHGTVHSPSP
N315 MKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVKADVQDLNHGTVHSPSP
NCTC8325 MKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVKADVQDLNHGTVHSPSP
Newman MKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVKADVQDLNHGTVHSPSP
USA300_FPR3757 MKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVKADVQDLNHGTVHSPSP
************************************************************
COL VDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIMKSIVKSVMDSGFDGYFLI
N315 VDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIMKSIVKSVMDSGFDGYFLI
NCTC8325 VDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIMKSIVKSVMDSGFDGYFLI
Newman VDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIMKSIVKSVMDSGFDGYFLI
USA300_FPR3757 VDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIMKSIVKSVMDSGFDGYFLI
************************************************************
COL AANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLISQELGVAPSSVDASIIGEHGD
N315 AANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLISQELGVAPSSVDASIIGEHGD
NCTC8325 AANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLISQELGVAPSSVDASIIGEHGD
Newman AANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLISQELGVAPSSVDASIIGEHGD
USA300_FPR3757 AANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLISQELGVAPSSVDASIIGEHGD
************************************************************
COL TELAVWSQANVAGISVYDTLKEQTGSEAKAEEIYVNTRDAAYEIIQAKGSTYYGIALALM
N315 TELAVWSQANVAGISVYDTLKEQTGSEAKAEEIYVNTRDAAYEIIQAKGSTYYGIALALM
NCTC8325 TELAVWSQANVAGISVYDTLKEQTGSEAKAEEIYVNTRDAAYEIIQAKGSTYYGIALALM
Newman TELAVWSQANVAGISVYDTLKEQTGSEAKAEEIYVNTRDAAYEIIQAKGSTYYGIALALM
USA300_FPR3757 TELAVWSQANVAGISVYDTLKEQTGSEAKAEEIYVNTRDAAYEIIQAKGSTYYGIALALM
************************************************************
COL RISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPTLVNQHGAVKIYEMPLSAEEQALFD
N315 RISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPTLVNQHGAVKIYEMPLSAEEQALFD
NCTC8325 RISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPTLVNQHGAVKIYEMPLSAEEQALFD
Newman RISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPTLVNQHGAVKIYEMPLSAEEQALFD
USA300_FPR3757 RISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPTLVNQHGAVKIYEMPLSAEEQALFD
************************************************************
COL KSVKTLEDTFDSIKYLLED
N315 KSVKILEDTFDSIKYLLED
NCTC8325 KSVKTLEDTFDSIKYLLED
Newman KSVKTLEDTFDSIKYLLED
USA300_FPR3757 KSVKTLEDTFDSIKYLLED
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