COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
NCBI: 23-MAY-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_pUSA030032
- pan locus tag?:
- symbol: nes
- pan gene symbol?: —
- synonym:
- product: oriT nickase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_pUSA030032
- symbol: nes
- product: oriT nickase
- replicon: pUSA03
- strand: -
- coordinates: 33233..34144
- length: 912
- essential: unknown
⊟Accession numbers[edit | edit source]
- Gene ID: 3912757 NCBI
- RefSeq: YP_492718 NCBI
- BioCyc:
- MicrobesOnline: 1291511 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901ATGGCAATGTACCATTTTCAAAATAAGTTTGTATCAAAAGCAAATGGACAAAGTGCAACT
GCAAAAAGTGCCTATAATAGCGCTAGTAGGATTAAAGATTTTAAGGAAAACGAATTTAAA
GATTACTCAAATAAGCAATGTGATTATAGTGAAATTTTATTACCTAATAATGCTGATGAT
AAGTTTAAAGATAGAGAATATTTGTGGAATAAAGTTCATGATGTTGAGAACAGAAAAAAT
AGTCAAGTTGCACGAGAAATTATAATTGGTTTGCCGAATGAATTTGATCCAAATAGTAAT
ATTGAATTAGCAAAAGAATTTGCTGAATCCTTATCTAATGAAGGAATGATTGTTGATCTA
AATATTCATAAAATAAATGAAGAAAATCCTCACGCACATTTATTATGTACATTACGTGGT
TTAGATAAAAATAATGAATTTGAACCTAAGCGAAAGGGCAATGATTATATTAGAGATTGG
AATACAAAAGAAAAACATAATGAATGGCGAAAACGGTGGGAAAATGTTCAAAATAAACAC
CTAGAAAAGAATGGTTTTTCTGTTAGAGTTTCTGCTGATTCATATAAAAATCAAAATATA
GATTTAGAGCCAACAAAAAAAGAAGGTTGGAAAGCACGAAAATTTGAAGATGAAACAGGA
AAAAAATCTTCAATATCGAAACATAATGAAAGTATTAAAAAGAGAAATCAGCAAAAAATT
GATAAGATGTTTAATGAAGTAGATGATATGAAATCTCACAAATTAAATGCTTTTAGTTAT
ATGAATAAATCAGATTCTACTACATTAAAAAATATGGCCAAAGATTTAAAAATTTATGTA
ACACCTATAAATATGTATAAGGAAAATGAAAGACTATATGATTTAAAACAAAAAAACTTC
ATTAATCACTGA60
120
180
240
300
360
420
480
540
600
660
720
780
840
900
912
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_pUSA030032
- symbol: Nes
- description: oriT nickase
- length: 303
- theoretical pI: 9.50844
- theoretical MW: 35854.9
- GRAVY: -1.21848
⊟Function[edit | edit source]
- TIGRFAM: Ti-type conjugative transfer relaxase TraA (TIGR02768; HMM-score: 204.6)
- TheSEED :
- oriT nickase Nes
- ⊞PFAM: Rep (CL0169) MobA_MobL; MobA/MobL family (PF03389; HMM-score: 188.1)and 2 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MAMYHFQNKFVSKANGQSATAKSAYNSASRIKDFKENEFKDYSNKQCDYSEILLPNNADDKFKDREYLWNKVHDVENRKNSQVAREIIIGLPNEFDPNSNIELAKEFAESLSNEGMIVDLNIHKINEENPHAHLLCTLRGLDKNNEFEPKRKGNDYIRDWNTKEKHNEWRKRWENVQNKHLEKNGFSVRVSADSYKNQNIDLEPTKKEGWKARKFEDETGKKSSISKHNESIKKRNQQKIDKMFNEVDDMKSHKLNAFSYMNKSDSTTLKNMAKDLKIYVTPINMYKENERLYDLKQKNFINH
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available