NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_2320 [new locus tag: SAUSA300_RS12820 ]
- pan locus tag?: SAUPAN005892000
- symbol: SAUSA300_2320
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_2320 [new locus tag: SAUSA300_RS12820 ]
- symbol: SAUSA300_2320
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2494056..2494487
- length: 432
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3914006 NCBI
- RefSeq: YP_494955 NCBI
- BioCyc: see SAUSA300_RS12820
- MicrobesOnline: 1293835 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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421ATGCGTAGGTTATTATATTCATTTCTTTTTTATATGATCATAGGTTTATTTAGTGGCTTT
TTCTATAGAGAGCTAACAAAAGCATATGATTTTACTGGTACAACACAATTATCACTTGTA
CACACACATACACTTATTTTAGGTATGTTTATGTTTTTAATATTATTACCATTGGAGAAG
TTATTTAAATTATCAAGTTACTACTTATTTAACTGGTTCTTCTATGTATATAACATAGGT
GTTATCGTTACTATAGGTATGATGGTGACAAAAGGATTCTTCCAAGTCACTGGTAAATCA
TACTCTCCAGAAGCATTTGCAGGCTTTGCAGGTATTGGGCACACAGGTATGCTTGCAGGT
TTATTGTTGCTATTTTTCCTTTTAAGACAAGCAATTCTTAAAGAACCACGTGATGAGTCT
TTTAAAAAATAA60
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432
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_2320 [new locus tag: SAUSA300_RS12820 ]
- symbol: SAUSA300_2320
- description: hypothetical protein
- length: 143
- theoretical pI: 9.9925
- theoretical MW: 16589.7
- GRAVY: 0.64965
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- FIG01108300: hypothetical protein
- ⊞PFAM: no clan defined DUF2871; Protein of unknown function (DUF2871) (PF11070; HMM-score: 158.4)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MRRLLYSFLFYMIIGLFSGFFYRELTKAYDFTGTTQLSLVHTHTLILGMFMFLILLPLEKLFKLSSYYLFNWFFYVYNIGVIVTIGMMVTKGFFQVTGKSYSPEAFAGFAGIGHTGMLAGLLLLFFLLRQAILKEPRDESFKK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available