NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS11005 [old locus tag: SAUSA300_2001 ]
- pan locus tag?: SAUPAN005296000
- symbol: SAUSA300_RS11005
- pan gene symbol?: —
- synonym:
- product: DNA mismatch repair protein MutS
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS11005 [old locus tag: SAUSA300_2001 ]
- symbol: SAUSA300_RS11005
- product: DNA mismatch repair protein MutS
- replicon: chromosome
- strand: +
- coordinates: 2160091..2161701
- length: 1611
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2160091..2161701) NCBI
- BioCyc: SAUSA300_RS11005 BioCyc
- MicrobesOnline: see SAUSA300_2001
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1561ATGAGCACAAATCAAACATTTTTAATATTTGTTATAGCAATTATTCTACTTACATCTGTA
ATAGGAATTGTTGGACGATACATGAGTCGTCAACGTCTATTAAAATCTATGGAAACATTA
TGGCAAACGATTTCTCCATTAGAAGCTTTTATCAGACCGAACTCACATTTCGACTATGAG
TATAAGCTCTACAAGGAAAAATTTGAATCACATTCATTAGTTGATGATAAAACTTGGTCC
GACTTAAATATGAATGCAATCTTTCATAAGATGAATTATAATTTAACAGCTATTGGTGAA
ATGAAGCTATATGCCTGTTTACGTGGAATGCTTTCAATTACGAACAAATCATTACTTAGT
TTATTTAATGATAATGCTGAATTTAGAAAAAACGTAACATATCATTTAGCTTTGATTGGT
AAAACTGTTTATCCAACATTTCCAGACCAAATCACACCGGTAAAACGTCAAAATATATTG
TTTCTATGCCCGTTTTTACCAGTTATCTCATTTGCAGTTATATTTATTAATTCACAAGTT
GGTATTTTATTATTTCTTATGAGTTGCCTATTTAATATCATTTTATCAGCAACTTTAAAG
CGTACATATGAGGATGACTTAAAATCTATCTTTTATGCATCCAATGTTTTAAAACAAGGC
TATACTATCTCAAAAATTAAACATGCTCCACAACCTGAAGTCAATTTTAAGCAATTTAGA
ACAGCACGTCATTTAACGAGTGTTTTAGCTGAAGTTAATGATGAAGATATCGGAGCTATG
GTAATTAAACTAGTTAAACTTATTTTCATGCTTGATTATGTTTTATTTCATTCAATTCAA
AAAAGCTATACAACACATATGAATGAGCTTAAAAATTGTTTCGATTACATAGCTGAATTA
GATAATCATTATGCATTAGCAATGTATCGTAGAACGCTAGAATGTTATACTGAACCACAA
ATTGATGATTCAAATGATGGCATAGTATTCTCTGAGTTAACACATCCACTCATAGCAGAT
GCAGTAGCCAATGATTTCTCACTATCACAAAATATACTGTTAACTGGGTCTAATGCTTCG
GGTAAATCAACATTTATGAAATCCATAGCAATAAACATTATTCTTGCATCGGCTATACAA
ACAGTTACCGCAAGCAAATTTGTATATCAACCTGGAATTGTGTTCACGTCAATGGCAAAT
GCCGATGATGTGTTATCAGGCGATAGTTATTTTATGGCTGAATTAAAATCTATTAAGCGT
ATTGTTGAAATTCCAGATAATCAAAAAATATACTGCTTTATAGATGAAATTTTTAAAGGT
ACCAACACAACTGAACGAATTGCCGCTTCAGAATCAGTACTATCATTTTTACATGAAAAA
TCTAACTTTAGAGTTATTGCAGCAACACATGATATTGAGTTAGCTGAACTCTTAAAACAA
CGTTATGAAAATTACCATTTCAATGAGGTAATAGAAAATAATAACATACATTTTGATTAC
AAAATTAAGCCTGGCAAAGCAAATACACGTAATGCCATCGAATTATTAAAAATCACTTCA
TTTCCAGCAAAAATATATGAACGAGCAAAAGATAATGTCCCGAAAATTTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS11005 [old locus tag: SAUSA300_2001 ]
- symbol: SAUSA300_RS11005
- description: DNA mismatch repair protein MutS
- length: 536
- theoretical pI: 7.6459
- theoretical MW: 61321.6
- GRAVY: 0.0182836
⊟Function[edit | edit source]
- ⊞TIGRFAM: DNA metabolism DNA replication, recombination, and repair DNA mismatch repair protein MutS (TIGR01070; HMM-score: 120.7)and 4 more
- TheSEED: see SAUSA300_2001
- ⊞PFAM: P-loop_NTPase (CL0023) MutS_V; MutS domain V (PF00488; HMM-score: 104.3)and 10 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI: 446028475 NCBI
- RefSeq: WP_000106330 NCBI
- UniProt: see SAUSA300_2001
⊟Protein sequence[edit | edit source]
- MSTNQTFLIFVIAIILLTSVIGIVGRYMSRQRLLKSMETLWQTISPLEAFIRPNSHFDYEYKLYKEKFESHSLVDDKTWSDLNMNAIFHKMNYNLTAIGEMKLYACLRGMLSITNKSLLSLFNDNAEFRKNVTYHLALIGKTVYPTFPDQITPVKRQNILFLCPFLPVISFAVIFINSQVGILLFLMSCLFNIILSATLKRTYEDDLKSIFYASNVLKQGYTISKIKHAPQPEVNFKQFRTARHLTSVLAEVNDEDIGAMVIKLVKLIFMLDYVLFHSIQKSYTTHMNELKNCFDYIAELDNHYALAMYRRTLECYTEPQIDDSNDGIVFSELTHPLIADAVANDFSLSQNILLTGSNASGKSTFMKSIAINIILASAIQTVTASKFVYQPGIVFTSMANADDVLSGDSYFMAELKSIKRIVEIPDNQKIYCFIDEIFKGTNTTERIAASESVLSFLHEKSNFRVIAATHDIELAELLKQRYENYHFNEVIENNNIHFDYKIKPGKANTRNAIELLKITSFPAKIYERAKDNVPKI
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available