NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL_RS13035 [old locus tag: SACOL2487 ]
- pan locus tag?: SAUPAN006049000
- symbol: SACOL_RS13035
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL_RS13035 [old locus tag: SACOL2487 ]
- symbol: SACOL_RS13035
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2542946..2543368
- length: 423
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421ATGAACAAAAAACATGTTTTTATAATTATTGGTGTCATTTTATGTATATGTATAGTTGCA
TCAGTCATTTATTTAAAAGTGAAATATGACGAAAAAGAAAAACAAAAAGCAATATACTAT
AAAGAACAACAGGAGCGTATTACACTCTATCTTAAGCATAATACTAAAGAACCCAATACC
ATCAAAACTGTACATTTCACAAGTTTAAAAAGAGGACCTATGGGCGATGCAGTAATTGAA
GGTTACATAAATGAAAATAAAGAAGATGATTTTGTTGCATATGGGTCTCCAGAACATAAT
TATCAATTTGGTGGAAGTTTAATCAAAAGTAAAAATTTAAGCACGTTATTAAAACCAGTA
CATCAAACCAAATCACCTGATGAGATAAAAAAGGAATTAGAGTCTAAAAAGAACGACCGC
TAA60
120
180
240
300
360
420
423
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL_RS13035 [old locus tag: SACOL2487 ]
- symbol: SACOL_RS13035
- description: hypothetical protein
- length: 140
- theoretical pI: 9.61055
- theoretical MW: 16201.6
- GRAVY: -0.617143
⊟Function[edit | edit source]
- TIGRFAM: Transport and binding proteins Carbohydrates, organic alcohols, and acids D-galactonate transporter (TIGR00893; HMM-score: 15.7)Cellular processes Adaptations to atypical conditions phage shock protein B (TIGR02976; HMM-score: 13.2)Energy metabolism Electron transport cytochrome c oxidase, subunit II (TIGR02866; EC 1.9.3.1; HMM-score: 12.8)
- TheSEED: see SACOL2487
- ⊞PFAM: no clan defined DUF1433; Protein of unknown function (DUF1433) (PF07252; HMM-score: 134.9)and 7 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MNKKHVFIIIGVILCICIVASVIYLKVKYDEKEKQKAIYYKEQQERITLYLKHNTKEPNTIKTVHFTSLKRGPMGDAVIEGYINENKEDDFVAYGSPEHNYQFGGSLIKSKNLSTLLKPVHQTKSPDEIKKELESKKNDR
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available