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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA1309 [new locus tag: SA_RS07420 ]
- pan locus tag?: SAUPAN003942000
- symbol: cmk
- pan gene symbol?: cmk
- synonym:
- product: cytidylate kinase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA1309 [new locus tag: SA_RS07420 ]
- symbol: cmk
- product: cytidylate kinase
- replicon: chromosome
- strand: -
- coordinates: 1515587..1516246
- length: 660
- essential: yes DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1124149 NCBI
- RefSeq: NP_374592 NCBI
- BioCyc: see SA_RS07420
- MicrobesOnline: 103618 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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601ATGAAAGCCATTAATATTGCATTAGATGGTCCAGCTGCTGCCGGAAAAAGTACAATTGCG
AAACGTGTAGCCAGCGAACTATCAATGATTTATGTCGATACAGGAGCAATGTATCGTGCA
TTAACATACAAATATTTAAAATTAAACAAAACTGAGGACTTTGCAAAACTAGTTGACCAA
ACAACATTAGATTTAACTTATAAAGCAGATAAAGGTCAATGTGTCATTTTAGATAACGAA
GATGTAACAGACTTTTTAAGAAATAATGATGTGACGCAACATGTTTCATACGTTGCATCT
AAAGAGCCAGTACGTTCATTCGCCGTTAAAAAACAAAAAGAGTTAGCTGCAGAAAAAGGT
ATCGTAATGGATGGTCGCGATATCGGAACTGTAGTGCTACCAGATGCAGATTTAAAAGTA
TATATGATTGCATCAGTTGAAGAGCGAGCAGAAAGAAGATATAAAGATAATCAATTAAGA
GGTATCGAATCAAATTTTGAAGATTTAAAACGTGATATTGAAGCTCGTGATCAATATGAC
ATGAACCGTGAAATATCACCATTAAGAAAAGCAGATGATGCAGTGACATTAGATACGACA
GGCAAGTCGATTGAAGAAGTTACTGACGAAATTTTAGCGATGGTGAGTCAAATTAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA1309 [new locus tag: SA_RS07420 ]
- symbol: Cmk
- description: cytidylate kinase
- length: 219
- theoretical pI: 4.8264
- theoretical MW: 24594.8
- GRAVY: -0.435616
⊟Function[edit | edit source]
- ⊞reaction: EC 2.7.4.25? ExPASy
- ⊞TIGRFAM: Purines, pyrimidines, nucleosides, and nucleotides Nucleotide and nucleoside interconversions cytidylate kinase (TIGR00017; EC 2.7.4.14; HMM-score: 243.5)and 3 more
- TheSEED :
- Cytidylate kinase (EC 2.7.4.25)
- ⊞PFAM: P-loop_NTPase (CL0023) Cytidylate_kin; Cytidylate kinase (PF02224; HMM-score: 236.7)and 10 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKAINIALDGPAAAGKSTIAKRVASELSMIYVDTGAMYRALTYKYLKLNKTEDFAKLVDQTTLDLTYKADKGQCVILDNEDVTDFLRNNDVTQHVSYVASKEPVRSFAVKKQKELAAEKGIVMDGRDIGTVVLPDADLKVYMIASVEERAERRYKDNQLRGIESNFEDLKRDIEARDQYDMNREISPLRKADDAVTLDTTGKSIEEVTDEILAMVSQIK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available