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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_1187 [new locus tag: SAUSA300_RS06415 ]
- pan locus tag?: SAUPAN003598000
- symbol: SAUSA300_1187
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_1187 [new locus tag: SAUSA300_RS06415 ]
- symbol: SAUSA300_1187
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 1305857..1306348
- length: 492
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3914239 NCBI
- RefSeq: YP_493884 NCBI
- BioCyc: see SAUSA300_RS06415
- MicrobesOnline: 1292702 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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481ATGAAATCAAGAAAACTGGCTATAACTGCACTTTTAATTGCAATAAATGTTGTATTAAGC
AGTATTATCATCATTCCTCTAGGACCAGTTAAGGCAGCACCAGTACAGCATTTTGTAAAT
GTATTAAGTGCGGTCATAGTAGGTCCTTGGTATGGATTAGCTCAAGCGCTTATATCATCA
ATTTTAAGAGTTCTTTTTGGTACTGGTACAGCTTTTGCATTTCCGGGTAGTATGATTGGA
GTTTTATTGGCTAGTATGTTTTACATATATCGTAAACATATATTTATGGCCGCGGTCGGT
GAAGTACTTGGAACTGGTGTCATCGGAAGTTTAATTTGTATACCATTAGCATATTTCCTT
GGGCTTCAAGACTTCTTCATTAAACCGTTAATGATTACGTTCATAGTCTCAAGTGCTATC
GGATCTATTATAAGTTATTTCTTATTAATTACTCTAAAAAAACGTGGTATTCTTCAAAGG
TTTATAAAATAA60
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492
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_1187 [new locus tag: SAUSA300_RS06415 ]
- symbol: SAUSA300_1187
- description: hypothetical protein
- length: 163
- theoretical pI: 10.9181
- theoretical MW: 17600.5
- GRAVY: 1.23067
⊟Function[edit | edit source]
- ⊞TIGRFAM: Biosynthesis of cofactors, prosthetic groups, and carriers Thiamine energy coupling factor transporter S component ThiW (TIGR02359; HMM-score: 207)Transport and binding proteins Other energy coupling factor transporter S component ThiW (TIGR02359; HMM-score: 207)and 2 more
- ⊞TheSEED :
- Substrate-specific component ThiW of predicted thiazole ECF transporter
Cofactors, Vitamins, Prosthetic Groups, Pigments Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory Thiamin biosynthesis Substrate-specific component ThiW of predicted thiazole ECF transporterand 1 more - ⊞PFAM: Gx_transp (CL0315) ThiW; Thiamine-precursor transporter protein (ThiW) (PF09512; HMM-score: 181.3)and 3 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKSRKLAITALLIAINVVLSSIIIIPLGPVKAAPVQHFVNVLSAVIVGPWYGLAQALISSILRVLFGTGTAFAFPGSMIGVLLASMFYIYRKHIFMAAVGEVLGTGVIGSLICIPLAYFLGLQDFFIKPLMITFIVSSAIGSIISYFLLITLKKRGILQRFIK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available