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04-0298108BA0217611819-9771193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40

NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS13800
  • pan locus tag?:
  • symbol: NWMN_RS13800
  • pan gene symbol?:
  • synonym:
  • product: fibronectin-binding protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS, pseudogene
  • locus tag: NWMN_RS13800
  • symbol: NWMN_RS13800
  • product: fibronectin-binding protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2638828..2641842
  • length: 3015
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_009641 (2638828..2641842) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    GTGAAAAACAATCTTAGGTACGGCATTAGAAAACATAAATTGGGAGCAGCATCAGTATTC
    TTAGGAACAATGATCGTTGTTGGGATGGGACAAGACAAAGAAGCTGCAGCATCAGAACAA
    AAGACAACTACAGTAGAAGAAAATGGGAATTCAGCTACTGATAATAAAACAAGTGAAACA
    CAAACAACTGCAACTAACGTTAATCATATAGAAGAAACTCAATCATATAACGCAACAGTA
    ACAGAACAACCGTCAAACGCAACACAAGTAACAACTGAAGAAGCACCAAAAGCAGTACAA
    GCACCACAAACTGCACAACCAGCAAATATAGAAACAGTTAAAGAAGAGGTAGTTAAGGAA
    GAAGCGAAACCTCAAGTTAAGGAAACAACACAATCTCAAGACAATAGCGGAGATCAAAGA
    CAAGTAGATTTAACACCTAAAAAGGCTACACAAAATCAAGTCGCAGAAACACAAGTTGAA
    GTGGCACAGCCAAGAACGGCATCAGAAAGTAAGCCACGTGTGACAAGATCAGCAGATGTA
    GCGGAAGCTAAGGAAGCTAGTAACGCGAAAGTGGAAACGGGTACAGATGTAACAAGTAAA
    GTTACAGTAGAAATTGGTTCTATTGAGGGGCATAACAATACAAATAAAGTAGAACCTCAT
    GCAGGACAACGAGCGGTACTAAAATATAAGTTGAAATTTGAGAATGGTTTACATCAAGGT
    GACTACTTTGACTTTACTTTATCAAATAATGTAAATACGCATGGCGTATCAACTGCTAGA
    AAAGTACCAGAAATTAAAAATGGTTCAGTCGTAATGGCGACAGGTGAAGTTTTAGAAGGT
    GGAAAGATTAGATATACATTTACAAATGATATTGAAGATAAGGTTGATGTAACGGCTGAA
    CTAGAAATTAATTTATTTATTGATCCTAAAACTGTACAAACTAATGGAAATCAAACTATA
    ACTTCAACACTAAATGAAGAACAAACTTCAAAGGAATTAGATGTTAAATATAAAGATGGT
    ATTGGGAATTATTATGCCAATTTAAATGGATCGATTGAGACATTTAATAAAGCGAATAAT
    AGATTTTCGCATGTTGCATTTATTAAACCTAATAATGGTAAAACGACAAGTGTGACTGTT
    ACTGGAACTTTAATGAAAGGTAGTAATCAGAATGGAAATCAACCAAAAGTTAGGATATTT
    GAATACTTGGGTAATAATGAAGACATAGCGAAGAGTGTATATGCAAATACGACAGATACT
    TCTAAATTTAAAGAAGTCACAAGTAATATGAGTGGGAATTTGAATTTACAAAATAATGGA
    AGCTATTCATTGAATATAGAAAATCTAGATAAAACTTATGTTGTTCACTATGATGGAGAG
    TATTTAAATGGTACTGATGAAGTTGATTTTAGAACACAAATGGTAGGACATCCAGAGCAA
    CTTTATAAGTATTATTATGATAGAGGATATACCTTAACTTGGGATAATGGTTTAGTTTTA
    TACAGTAATAAAGCGAACGGAAATGGGAAAAATGGTCCGATTATTCAAAATAATAAATTT
    GAATATAAAGAAGATACAATTAAAGAAACTCTTACAGGTCAATATGATAAGAATTTAGTA
    ACTACTGTTGAAGAGGAATATGATTCATCAACTCTTGACATTGATTACCACACAGCTATA
    GATGGTGGAGGTGGATATGTTGATGGATACATTGAAACAATAGAAGAAACGGATTCATCA
    GCTATTGATATCGATTACCATACTGCTGTGGATAGCGAAGCAGGTCACGTTGGAGGATAC
    ACTGAGTCCTCTGAGGAATCAAATCCAATTGACTTTGAAGAATCGACACATGAAAATTCA
    AAACATCATGCTGATGTTGTTGAATATGAAGAAGATACAAACCCAGGTGGTGGTCAGGTT
    ACTACTGAGTCTAACCTAGTTGAATTTGACGAAGATTCTACAAAAGGTATTGTAACTGGT
    GCTGTTAGCGATCATACAACAATTGAAGATACGAAAGAATATACGACTGAAAGTAATCTG
    ATTGAACTAGTAGATGAACTACCTGAAGAACATGGTCAAGCGCAAGGACCAATCGAGGAA
    ATTACTGAAAACAATCATCATATTTCTCATTCTGGTTTAGGAACTGAAAATGGTCACGGT
    AATTATGGCGTGATTGAAGAAATCGAAGAAAATAGCCACGTGGATATTAAGAGTGAATTA
    GGTTAGGAAGGTGGCCAAAATAGCGGTAATCAGTCATTTGAGGAAGACACAGAAGAAGAT
    AAACCGAAATATGAACAAGGTGGCAATATCGTAGATATCGATTTCGATAGTGTACCTCAA
    ATTCATGGTCAAAATAATGGTAACCAATCATTCGAAGAAGATACAGAGAAAGACAAACCT
    AAGTATGAACAAGGTGGTAATATCATTGATATCGACTTCGACAGTGTGCCACATATTCAC
    GGATTCAATAAGCACACTGAAATTATTGAAGAAGATACAAATAAAGATAAACCAAATTAT
    CAATTCGGTGGACACAATAGTGTTGACTTTGAAGAAGATACACTTCCACAAGTAAGTGGT
    CATAATGAAGGTCAACAAACGATTGAAGAAGATACAACACCTCCAATCGTGCCACCAACG
    CCACCGACACCAGAAGTACCAAGCGAGCCGGAAACACCAACACCACCGACACCAGAAGTA
    CCAAGCGAGCCGGAAACACCAACACCGCCAACGCCAGAGGTACCAACTGAACCTGGTAAA
    CCAATACCACCTGCTAAAGAAGAACCTAAAAAACCTTCTAAACCAGTGGAACAAGGTAAA
    GTAGTAACACCTGTTATTGAAATCAATGAAAAGGTTAAAGCAGTGGTACCAACTAAAAAA
    GCACAATCTAAGAAATCTGAACTACCTGAAACAGGTGGAGAAGAATCAACAAACAACGGC
    ATGTTGTTCGGCGGATTATTTAGCATTCTAGGTTTAGCATTATTACGCAGAAATAAAAAG
    AATCACAAAGCATAA
    60
    120
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    300
    360
    420
    480
    540
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    660
    720
    780
    840
    900
    960
    1020
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    1140
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    1260
    1320
    1380
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    1560
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    1920
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    2160
    2220
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    2340
    2400
    2460
    2520
    2580
    2640
    2700
    2760
    2820
    2880
    2940
    3000
    3015

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_RS13800
  • symbol: NWMN_RS13800
  • description: fibronectin-binding protein
  • length: 0
  • theoretical pI:
  • theoretical MW:
  • GRAVY:

Function[edit source | edit]

  • TIGRFAM:
  • TheSEED:
  • PFAM:

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb:
  • LocateP:
  • SignalP:
  • predicted transmembrane helices (TMHMM):

Accession numbers[edit source | edit]

  • GI:
  • RefSeq:
  • UniProt:

Protein sequence[edit source | edit]

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • NWMN_RS13800 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]