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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS07890 [old locus tag: SACOL1549 ]
  • pan locus tag?: SAUPAN004039000
  • symbol: SACOL_RS07890
  • pan gene symbol?: zwf
  • synonym:
  • product: glucose-6-phosphate dehydrogenase

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS07890 [old locus tag: SACOL1549 ]
  • symbol: SACOL_RS07890
  • product: glucose-6-phosphate dehydrogenase
  • replicon: chromosome
  • strand: +
  • coordinates: 1584167..1585651
  • length: 1485
  • essential: unknown other strains

Accession numbers[edit | edit source]

  • Location: NC_002951 (1584167..1585651) NCBI
  • BioCyc: G1G4B-1660 BioCyc
  • MicrobesOnline: see SACOL1549

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    TTGAGTACTAAAAACAAACACATCCCATGTTTAATCACAATCTTTGGTGCAACTGGTGAC
    TTAAGCCATCGTAAGTTGTTTCCATCAATATTCCATCTCTACCAACAAGACAATTTAGAT
    GAACATATTGCCATCATCGGTATTGGACGTCGTGACATTACTAATGATGATTTCCGTAAT
    CAAGTAAAATCATCAATTCAAAAGCACGTAAAAGATACAAACAAAATTGACGCGTTTATG
    GAACATGTCTTCTATCATAGACATGATGTTAGTAATGAAGAAAGCTATCAAGAATTACTA
    GATTTTAGTAATGAATTAGATAGCCAATTTGAATTAAAAGGTAATCGACTATTCTATTTA
    GCAATGGCACCACAATTCTTTGGCGTTATTTCTGATTATCTAAAATCTTCTGGTCTTACT
    GATACAAAAGGATTTAAACGCCTTGTTATCGAAAAACCATTCGGTAGTGATTTAAAATCA
    GCCGAAGCATTAAACAATCAAATTCGTAAATCATTTAAAGAAGAAGAAATTTATCGTATT
    GACCACTATTTAGGAAAAGACATGGTTCAAAATATCGAGGTATTACGTTTTGCGAATGCG
    ATGTTTGAACCATTATGGAATAACAAATATATTTCAAACATCCAAGTTACATCTTCTGAA
    ATACTAGGTGTTGAAGATCGTGGTGGTTATTATGAATCAAGTGGCGCGCTAAAAGATATG
    GTGCAAAACCACATGTTACAAATGGTTGCATTATTAGCTATGGAAGCACCTATTAGTTTA
    AATAGTGAAGATATCCGTGCTGAGAAAGTAAAAGTACTTAAATCACTGCGTCATTTCCAA
    TCTGAAGATGTTAAAAAGAACTTTGTTCGTGGTCAATATGGCGAAGGCTATATCGATGGT
    AAACAAGTTAAAGCATACCGTGATGAAGATCGCGTTGCAGATGACTCTAACACACCTACC
    TTTGTTTCAGGTAAATTAACAATTGATAACTTTAGATGGGCTGGTGTACCATTCTATATT
    CGTACTGGTAAACGTATGAAATCTAAAACAATTCAAGTTGTCGTTGAATTTAAAGAAGTA
    CCAATGAACTTATACTATGAAACTGATAAACTGTTAGATTCAAACCTATTAGTAATCAAT
    ATCCAACCTAATGAAGGTGTATCTTTACATCTAAATGCTAAGAAAAATACACAAGGTATC
    GAAACAGAACCTGTCCAATTGTCTTACTCAATGAGCGCTCAAGATAAAATGAATACTGTA
    GATGCATATGAAAATCTATTATTTGATTGTCTTAAAGGTGATGCCACTAACTTCACGCAC
    TGGGAAGAATTAAAATCAACATGGAAATTTGTTGATGCAATTCAAGATGAATGGAATATG
    GTTGATCCAGAATTCCCTAACTATGAATCAGGTACTAATGGTCCATTAGAAAGTGATTTA
    CTACTTGCTCGTGATGGTAACCATTGGTGGGACGATATTCAATAA
    60
    120
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    840
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    1140
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    1260
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    1440
    1485

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SACOL_RS07890 [old locus tag: SACOL1549 ]
  • symbol: SACOL_RS07890
  • description: glucose-6-phosphate dehydrogenase
  • length: 494
  • theoretical pI: 5.18811
  • theoretical MW: 56964.8
  • GRAVY: -0.531377

Function[edit | edit source]

  • reaction:
    EC 1.1.1.49?  ExPASy
    Glucose-6-phosphate dehydrogenase (NADP+) D-glucose 6-phosphate + NADP+ = 6-phospho-D-glucono-1,5-lactone + NADPH
  • TIGRFAM:
    Metabolism Energy metabolism Pentose phosphate pathway glucose-6-phosphate dehydrogenase (TIGR00871; EC 1.1.1.49; HMM-score: 635.3)
  • TheSEED: see SACOL1549
  • PFAM:
    no clan defined G6PD_C; Glucose-6-phosphate dehydrogenase, C-terminal domain (PF02781; HMM-score: 378.2)
    and 1 more
    NADP_Rossmann (CL0063) G6PD_N; Glucose-6-phosphate dehydrogenase, NAD binding domain (PF00479; HMM-score: 207.7)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.023101
    • TAT(Tat/SPI): 0.000621
    • LIPO(Sec/SPII): 0.034757
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MSTKNKHIPCLITIFGATGDLSHRKLFPSIFHLYQQDNLDEHIAIIGIGRRDITNDDFRNQVKSSIQKHVKDTNKIDAFMEHVFYHRHDVSNEESYQELLDFSNELDSQFELKGNRLFYLAMAPQFFGVISDYLKSSGLTDTKGFKRLVIEKPFGSDLKSAEALNNQIRKSFKEEEIYRIDHYLGKDMVQNIEVLRFANAMFEPLWNNKYISNIQVTSSEILGVEDRGGYYESSGALKDMVQNHMLQMVALLAMEAPISLNSEDIRAEKVKVLKSLRHFQSEDVKKNFVRGQYGEGYIDGKQVKAYRDEDRVADDSNTPTFVSGKLTIDNFRWAGVPFYIRTGKRMKSKTIQVVVEFKEVPMNLYYETDKLLDSNLLVINIQPNEGVSLHLNAKKNTQGIETEPVQLSYSMSAQDKMNTVDAYENLLFDCLKGDATNFTHWEELKSTWKFVDAIQDEWNMVDPEFPNYESGTNGPLESDLLLARDGNHWWDDIQ

Experimental data[edit | edit source]

  • experimentally validated: see SACOL1549
  • protein localization: see SACOL1549
  • quantitative data / protein copy number per cell: see SACOL1549
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]