NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus COL
- locus tag: SACOL_RS09010 [old locus tag: SACOL1762 ]
- pan locus tag?: SAUPAN004365000
- symbol: SACOL_RS09010
- pan gene symbol?: tpx
- synonym:
- product: 2-Cys peroxiredoxin
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: SACOL_RS09010 [old locus tag: SACOL1762 ]
- symbol: SACOL_RS09010
- product: 2-Cys peroxiredoxin
- replicon: chromosome
- strand: -
- coordinates: 1801857..1802351
- length: 495
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_002951 (1801857..1802351) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
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481ATGACTGAAATAACATTCAAAGGTGGACCAATCCACTTAAAAGGTCAACAAATTAATGAA
GGTGATTTTGCACCTGATTTTACAGTGTTAGATAATGACTTAAATCAAGTAACATTAGCA
GATTATGCTGGTAAAAAGAAATTAATTAGTGTGGTACCATCAATTGATACAGGTGTTTGT
GATCAGCAGACTCGCAAATTCAACTCTGATGCTTCTAAAGAAGAGGGGATTGTGCTTACA
ATTTCAGCAGACTTACCATTCGCACAAAAAAGATGGTGCGCTTCAGCAGGTTTAGACAAT
GTCATTACATTAAGTGACCACCGTGACTTATCATTTGGTGAAAACTATGGCGTTGTTATG
GAAGAACTTCGCTTATTAGCTCGTGCAGTATTTGTATTAGATGCAGATAATAAAGTTGTT
TATAAAGAAATCGTTAGTGAAGGTACTGATTTCCCAGATTTTGATGCTGCTTTAGCTGCA
TACAAAAATATTTAA60
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⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: SACOL_RS09010 [old locus tag: SACOL1762 ]
- symbol: SACOL_RS09010
- description: 2-Cys peroxiredoxin
- length: 164
- theoretical pI: 4.33649
- theoretical MW: 18005.2
- GRAVY: -0.134146
⊟Function[edit source | edit]
- reaction: EC 1.11.1.15? ExPASyPeroxiredoxin2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH
- TIGRFAM: Cellular processesDetoxificationperoxiredoxin (TIGR03137; EC 1.11.1.15; HMM-score: 25.2)Cellular processesAdaptations to atypical conditionsperoxiredoxin (TIGR03137; EC 1.11.1.15; HMM-score: 25.2)
- TheSEED:
- PFAM: Thioredoxin (CL0172) Redoxin; Redoxin (PF08534; HMM-score: 89.4)AhpC-TSA; AhpC/TSA family (PF00578; HMM-score: 64.6)
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.111
- Ymax_pos: 69
- Cmax: 0.117
- Cmax_pos: 25
- Smax: 0.15
- Smax_pos: 21
- Smean: 0.092
- D: 0.104
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASKEEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- SACOL_RS09010 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]