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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS10130 [old locus tag: SACOL1937 ]
  • pan locus tag?: SAUPAN004893000
  • symbol: SACOL_RS10130
  • pan gene symbol?: ampS
  • synonym:
  • product: aminopeptidase

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL_RS10130 [old locus tag: SACOL1937 ]
  • symbol: SACOL_RS10130
  • product: aminopeptidase
  • replicon: chromosome
  • strand: -
  • coordinates: 2000978..2002234
  • length: 1257
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (2000978..2002234) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    GTGGGAATTTTGACTAATTACAAAGAAAAGTTACAACAATACGCTGAACTATTAGTTAAG
    GTTGGTATGAATGTTCAACCAAAACAGCCAGTATTTATTAGATCATCAGTAGAAACATTA
    GAATTAACGCATTTAATTGTAGAAGAAGCATATCATTGTGGCGCTTCAGATGTACGTGTT
    GTATATAGCGATCCAACCTTAAAACGCTTAAAATTTGAAAATGAATCTGTGGAACATTTT
    GCTAATCATGAGATAAAATCATATGATGTTGAAGCGAGAATGGATTACGTTAAACGTGGC
    GCTGCTAATTTAGCACTTATTAGTGAAGATCCTGATTTAATGGATGGTATCGATAGCCAA
    AAATTACAAGCATTTCAACAACAAAACGCACGCGCATTTAAAGGATATATGGAAAGTGTA
    CAAAAAAATCAATTTCCATGGGTCGTAGCTGCTTTTCCATCTAAAGCTTGGGCGAAGAGA
    GTGTATCCTGAACTATCTGTAGAAGAAGCATATATTAAGTTTATTGACGAGGTATTCGAT
    ATTGTGCGAATTGATGGTAACGATCCAGTTGAAAATTGGCGTCAACACATCGCTAATTTA
    AGTGTTTACGCTCAAAAGTTACAACAAAAAAATTACCATGCGTTGCATTATGTATCTGAA
    GGTACTGATTTAACAGTAGGTTTAGCGAAAAATCATATCTGGGAAGATGCTACAAGTTAT
    GTTAACGGCAAGGAACAAGCTTTTATTGCTAATATACCAACTGAAGAAGTATTTACAGCA
    CCAGATCGAAATAGAGTAGATGGATATGTTACTAATAAATTGCCTTTAAGTTATAATGGC
    ACAATTATCGATCAATTTAAATTGATGTTTAAAGATGGAGAGATTATTGATTTTTCAGCT
    GGAAAAGGTGAAGCGGTATTGAAAGATTTAATCAATACTGATGAAGGTTCAAGAAGATTA
    GGTGAAGTAGCATTAGTACCTGATGATTCACCGATATCAAATCGTAATACCATTTTTTAC
    AATACTTTATTTGATGAAAATGCAGCATGTCATTTAGCGATTGGATCTGCTTACGCCTTT
    AATATTCAAGGTGGAACGGAAATGACTGTTGAGGAAAAGATTGCAAGCGGATTAAATGAT
    TCAAATGTACATGTCGATTTCATGATTGGTAGTAGTGATTTGACTATTTATGGCATATTC
    GAAGATGGTTCAAAAGAACTAGTATTTGAAAATGGAAATTGGGCATCAACATTTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
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    660
    720
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    840
    900
    960
    1020
    1080
    1140
    1200
    1257

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS10130 [old locus tag: SACOL1937 ]
  • symbol: SACOL_RS10130
  • description: aminopeptidase
  • length: 418
  • theoretical pI: 4.59124
  • theoretical MW: 47117.5
  • GRAVY: -0.327273

Function[edit source | edit]

  • reaction:
    EC 3.4.11.-?  ExPASy
  • TIGRFAM:
  • TheSEED:
  • PFAM:
    no clan definedPeptidase_M29; Thermophilic metalloprotease (M29) (PF02073; HMM-score: 533.6)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.116
    • Ymax_pos: 34
    • Cmax: 0.134
    • Cmax_pos: 34
    • Smax: 0.169
    • Smax_pos: 10
    • Smean: 0.111
    • D: 0.114
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI:
  • RefSeq: WP_001795438 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MGILTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRVVYSDPTLKRLKFENESVEHFANHEIKSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQKLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPELSVEEAYIKFIDEVFDIVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSYVNGKEQAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSAGKGEAVLKDLINTDEGSRRLGEVALVPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAFNIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSKELVFENGNWASTF

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS10130 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]