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Summary[edit source | edit]

  • pan ID?: SAUPAN000928000
  • symbol?:
  • description?: MFS transporter
  • strand?: +
  • coordinates?: 1194888..1196134
  • synteny block?: BlockID0004650
  • occurrence?: in 75% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0126
    08BA02176:
    C248_0115
    11819-97:
    MS7_0117
    71193:
    ST398NM01_0139
    ECT-R 2:
    ECTR2_81
    ED133:
    ED98:
    SAAV_0093
    HO 5096 0412:
    SAEMRSA15_00920
    JH1:
    SaurJH1_0116
    JH9:
    SaurJH9_0112
    JKD6008:
    SAA6008_00104
    JKD6159:
    LGA251:
    M013:
    MRSA252:
    SAR0128
    MSHR1132:
    MSSA476:
    SAS0100
    Mu3:
    SAHV_0124
    Mu50:
    SAV0125
    MW2:
    MW0099
    RF122:
    ST398:
    SAPIG0139
    T0131:
    TCH60:
    HMPREF0772_10372
    TW20:
    SATW20_01370
    USA300_TCH1516:
    USA300HOU_0137
    VC40:

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MEKNVEKSFIKIGLYFQIAYIVLMAITLCGFVICYGLIFGLFYLLSGSRADYLIVTIVIS
    N315            MEKNVEKSFIKIGLYFQIAYIVLMAITLCGFVICYGLIFGLFYLLSGSRADYLIVTIVIS
    NCTC8325        MEKNVEKSFIKIGLYFQIAYIVLMAITLCGFVICYGLIFGLFYLLSGSRADYLIVTIVIS
    Newman          MEKNVEKSFIKIGLYFQIAYIVLMAITLCGFVICYGLIFGLFYLLSGSRADYLIVTIVIS
    USA300_FPR3757  MEKNVEKSFIKIGLYFQIAYIVLMAITLCGFVICYGLIFGLFYLLSGSRADYLIVTIVIS
                    ************************************************************

    COL             AIISIFVIILSIVPVIVLASDLFKERISKGVILIVLAIIALVLCNFVSAILWFVSAISIL
    N315            AIISIFVIILSIVPVIVLASDLFKERISKGVILIVLAIIALVLCNFVSAILWFVSAISIL
    NCTC8325        AIISIFVIILSIVPVIVLASDLFKERISKGVILIVLAIIALVLCNFVSAILWFVSAISIL
    Newman          AIISIFVIILSIVPVIVLASDLFKERISKGVILIVLAIIALVLCNFVSAILWFVSAISIL
    USA300_FPR3757  AIISIFVIILSIVPVIVLASDLFKERISKGVILIVLAIIALVLCNFVSAILWFVSAISIL
                    ************************************************************

    COL             GRKKLVAAADTTTIQKSKGNANQASHKDTCKKELDSQDMMEHPEVKNPTTKNLEGFNEEI
    N315            GRKKLVAAADTTTIQKSKGNANQASHKDTCKKELDSQDMMEHPEVKNPTTKNLEGFNEEI
    NCTC8325        GRKKLVAAADTTTIQKSKGNANQASHKDTCKKELDSQDMMEHPEVKNPTTKNLEGFNEEI
    Newman          GRKKLVAAADTTTIQKSKGNANQASHKDTCKKELDSQDMMEHPEVKNPTTKNLEGFNEEI
    USA300_FPR3757  GRKKLVAAADTTTIQKSKGNANQASHKDTCKKELDSQDMMEHPEVKNPTTKNLEGFNEEI
                    ************************************************************

    COL             HKDEATTKVVSDNTEPPIESKDHVSKKD
    N315            HKDEATTKVVSDNTEPPIESKGHVSKKD
    NCTC8325        HKDEATTKVVSDNTEPPIESKDHVSKKD
    Newman          HKDEATTKVVSDNTEPPIESKDHVSKKD
    USA300_FPR3757  HKDEATTKVVSDNTEPPIESKDHVSKKD
                    *********************.******