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Summary[edit source | edit]

  • pan ID?: SAUPAN001069000
  • symbol?:
  • description?: Gfo/Idh/MocA family oxidoreductase

      descriptions from strain specific annotations:

    • Gfo/Idh/MocA family oxidoreductase
    • NAD-dependent oxidoreductase
    • NADH-dependent dehydrogenase
    • oxidoreductase, Gfo/Idh/MocA family
    • oxidoreductase , NAD-binding Rossmann fold family protein
    • oxidoreductase domain-containing protein
    • oxidoreductase family, NAD-binding Rossmann fold family protein
    • putative oxidoreductase
  • strand?: +
  • coordinates?: 1346052..1347131
  • synteny block?: BlockID0005910
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0218
    08BA02176:
    C248_0201
    11819-97:
    MS7_0203
    71193:
    ST398NM01_0227
    ECT-R 2:
    ECTR2_178
    ED133:
    SAOV_0155
    ED98:
    SAAV_0183
    HO 5096 0412:
    SAEMRSA15_01760
    JH1:
    SaurJH1_0208
    JH9:
    SaurJH9_0202
    JKD6008:
    SAA6008_00186
    JKD6159:
    SAA6159_00192
    LGA251:
    SARLGA251_01810
    M013:
    M013TW_0197
    MRSA252:
    SAR0209
    MSHR1132:
    SAMSHR1132_01830
    MSSA476:
    SAS0193
    Mu3:
    SAHV_0216
    Mu50:
    SAV0217
    MW2:
    MW0193
    RF122:
    SAB0156
    ST398:
    SAPIG0227
    T0131:
    SAT0131_00203
    TCH60:
    HMPREF0772_10290
    TW20:
    SATW20_02180
    USA300_TCH1516:
    USA300HOU_0224
    VC40:
    SAVC_00825

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             -MTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDY
    N315            MMTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDY
    NCTC8325        -MTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDY
    Newman          MMTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDY
    USA300_FPR3757  -MTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDY
                     ***********************************************************

    COL             KALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGK
    N315            KALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGK
    NCTC8325        KALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGK
    Newman          KALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGK
    USA300_FPR3757  KALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGK
                    ************************************************************

    COL             KLTIGYQNRFRADSQFLHQAAQRGDLGDIYFGKAHAIRRRAVPTWGVFLDEEAQGGGPLI
    N315            KLTIGYQNRFRPDSQFLHQAAQRGDLGDIYFGKAHAIRRRAVPTWGVFLNEEAQGGGPLI
    NCTC8325        KLTIGYQNRFRADSQFLHQAAQRGDLGDIYFGKAHAIRRRAVPTWGVFLDEEAQGGGPLI
    Newman          KLTIGYQNRFRADSQFLHQAAQRGDLGDIYFGKAHAIRRRAVPTWGVFLDEEAQGGGPLI
    USA300_FPR3757  KLTIGYQNRFRADSQFLHQAAQRGDLGDIYFGKAHAIRRRAVPTWGVFLDEEAQGGGPLI
                    ***********.*************************************:**********

    COL             DIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHHAANAWGSWNPDEFTVEDSAFGFIKM
    N315            DIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHDAANAWGSWNPDEFTVEDSAFGFIKM
    NCTC8325        DIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHHAANAWGSWNPDEFTVEDSAFGFIKM
    Newman          DIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHHAANAWGSWNPDEFTVEDSAFGFIKM
    USA300_FPR3757  DIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHHAANAWGSWNPDEFTVEDSAFGFIKM
                    **********************************.*************************

    COL             KNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKG
    N315            KNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKG
    NCTC8325        KNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKG
    Newman          KNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKG
    USA300_FPR3757  KNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKG
                    ************************************************************

    COL             VDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE
    N315            VDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE
    NCTC8325        VDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE
    Newman          VDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE
    USA300_FPR3757  VDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE
                    ***********************************************************