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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001134000
- symbol?: tarJ
- synonym:
- description?: ribitol-5-phosphate dehydrogenase
- ribitol-5-phosphate dehydrogenase
- alcohol dehydrogenase, zinc-containing
- putative alcohol dehydrogenase, zinc-containing
- zinc-binding dehydrogenase
- xylitol dehydrogenase
- zinc (Zn2+)-binding dehydrogenase
- alcohol dehydrogenase
- alcohol dehydrogenase, zinc-dependent
- alcohol dehydrogenase GroES-like domain protein
- putative zinc-binding dehydrogenase
- ribitol-5-phosphate 2-dehydrogenase
- zinc-binding dehydrogenase family protein
- zinc-containing alcohol dehydrogenase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1403475..1404527
- synteny block?: BlockID0006540
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0256
08BA02176:
C248_0244
11819-97:
MS7_0246
6850:
RSAU_000200
71193:
ST398NM01_0269
ECT-R 2:
ECTR2_217
ED133:
SAOV_0195
ED98:
SAAV_0224
HO 5096 0412:
SAEMRSA15_02150
JH1:
SaurJH1_0247
JH9:
SaurJH9_0241
JKD6008:
SAA6008_00230
JKD6159:
SAA6159_00233
LGA251:
SARLGA251_02200 (tarJ)
M013:
M013TW_0237
MRSA252:
SAR0253
MSHR1132:
SAMSHR1132_02240
MSSA476:
SAS0233
Mu3:
SAHV_0255
Mu50:
SAV0256
MW2:
MW0232
RF122:
SAB0195
ST398:
SAPIG0269
T0131:
SAT0131_00249 (greA)
TCH60:
HMPREF0772_10246 (tarJ)
TW20:
SATW20_02580 (tarJ)
USA300_TCH1516:
USA300HOU_0267
VC40:
SAVC_01020
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MINQVYQLVAPRQFEVTYNNVDIYSDYVIVRPLYMSICAADQRYYTGSRDENVLSQKLPM
N315 MINQVYQLVAPRQFEVTYNNVDIYSDYVIVRPLYMSICAADQRYYTGSRDENVLSQKLPM
NCTC8325 MINQVYQLVAPRQFEVTYNNVDIYSDYVIVRPLYMSICAADQRYYTGSRDENVLSQKLPM
Newman MINQVYQLVAPRQFEVTYNNVDIYSDYVIVRPLYMSICAADQRYYTGSRDENVLSQKLPM
USA300_FPR3757 MINQVYQLVAPRQFEVTYNNVDIYSDYVIVRPLYMSICAADQRYYTGSRDENVLSQKLPM
************************************************************
COL SLIHEGVGEVVFDSKGVFNKGTKVVMVPNTPTEKDDVIAENYLKSSYFRSSGHDGFMQDF
N315 SLIHEGVGEVVFDSKGVFNKGTKVVMVPNTPTEKDDVIAENYLKSSYFRSSGHDGFMQDF
NCTC8325 SLIHEGVGEVVFDSKGVFNKGTKVVMVPNTPTEKDDVIAENYLKSSYFRSSGHDGFMQDF
Newman SLIHEGVGEVVFDSKGVFNKGTKVVMVPNTPTEKDDVIAENYLKSSYFRSSGHDGFMQDF
USA300_FPR3757 SLIHEGVGEVVFDSKGVFNKGTKVVMVPNTPTEKDDVIAENYLKSSYFRSSGHDGFMQDF
************************************************************
COL VLLNHDRAVPLPDDIDLSIISYTELVTVSLHAIRRFEKKSISNKNTFGIWGDGNLGYITA
N315 VLLNHDRAVPLPDDIDLSIISYTELVTVSLHAIRRFEKKSISNKNTFGIWGDGNLGYITA
NCTC8325 VLLNHDRAVPLPDDIDLSIISYTELVTVSLHAIRRFEKKSISNKNTFGIWGDGNLGYITA
Newman VLLNHDRAVPLPDDIDLSIISYTELVTVSLHAIRRFEKKSISNKNTFGIWGDGNLGYITA
USA300_FPR3757 VLLNHDRAVPLPDDIDLSIISYTELVTVSLHAIRRFEKKSISNKNTFGIWGDGNLGYITA
************************************************************
COL ILLRKLYPESKIYVFGKTDYKLSHFSFVDDVFFINKIPEGLTFDHAFECVGGRGSQSAIN
N315 ILLRKLYPESKIYVFGKTDYKLSHFSFVDDVFFINKIPEGLTFDHAFECVGGRGSQSAIN
NCTC8325 ILLRKLYPESKIYVFGKTDYKLSHFSFVDDVFFINKIPEGLTFDHAFECVGGRGSQSAIN
Newman ILLRKLYPESKIYVFGKTDYKLSHFSFVDDVFFINKIPEGLTFDHAFECVGGRGSQSAIN
USA300_FPR3757 ILLRKLYPESKIYVFGKTDYKLSHFSFVDDVFFINKIPEGLTFDHAFECVGGRGSQSAIN
************************************************************
COL QMIDYISPEGSIALLGVSEFPVEVNTRLVLEKGLTLIGSSRSGSKDFQDVVDLYIQYPDI
N315 QMIDYISPEGSIALLGVSEFPVEVNTRLVLEKGLTLIGSSRSGSKDFQDVVDLYIQYPDI
NCTC8325 QMIDYISPEGSIALLGVSEFPVEVNTRLVLEKGLTLIGSSRSGSKDFQDVVDLYIQYPDI
Newman QMIDYISPEGSIALLGVSEFPVEVNTRLVLEKGLTLIGSSRSGSKDFQDVVDLYIQYPDI
USA300_FPR3757 QMIDYISPEGSIALLGVSEFPVEVNTRLVLEKGLTLIGSSRSGSKDFQDVVDLYIQYPDI
************************************************************
COL VDKLALLKGQEFEIATINDLTEAFEADLSTSWGKTVLKWIM
N315 VDKLALLKGQEYEIATINDLTEAFEADLSTSWGKTVLKWIM
NCTC8325 VDKLALLKGQEFEIATINDLTEAFEADLSTSWGKTVLKWIM
Newman VDKLALLKGQEFEIATINDLTEAFEADLSTSWGKTVLKWIM
USA300_FPR3757 VDKLALLKGQEFEIATINDLTEAFEADLSTSWGKTVLKWIM
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