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Summary[edit source | edit]

  • pan ID?: SAUPAN001186000
  • symbol?: esxB
  • description?: virulence factor EsxB

      descriptions from strain specific annotations:

    • virulence factor EsxB
    • ESAT-6/Esx family secreted protein EsxB
    • virulence factor EsxB family protein
    • virulence protein EsxB
  • strand?: +
  • coordinates?: 1456872..1457251
  • synteny block?: BlockID0007040
  • occurrence?: in 66% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0289 (esxB)
    08BA02176:
    11819-97:
    MS7_0280
    71193:
    ECT-R 2:
    ECTR2_250
    ED133:
    SAOV_0232
    ED98:
    SAAV_0257
    HO 5096 0412:
    JH1:
    SaurJH1_0280
    JH9:
    SaurJH9_0273
    JKD6008:
    JKD6159:
    SAA6159_00270 (esxB)
    LGA251:
    M013:
    MRSA252:
    MSHR1132:
    SAMSHR1132_02570
    MSSA476:
    SAS0265
    Mu3:
    SAHV_0287
    Mu50:
    SAV0290
    MW2:
    MW0265
    RF122:
    SAB0230
    ST398:
    T0131:
    TCH60:
    TW20:
    USA300_TCH1516:
    USA300HOU_0304 (esxB)
    VC40:
    SAVC_01200

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLL
    N315            MGGYKGIKADGGKVNQAKQLAAKIAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLL
    NCTC8325        MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLL
    Newman          MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLL
    USA300_FPR3757  MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLL
                    **************:******** ************************************

    COL             IMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
    N315            IMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
    NCTC8325        IMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
    Newman          IMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
    USA300_FPR3757  IMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
                    ********************************************