PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001416000
• symbol^?: dut
• synonym:
• description^?: dUTP pyrophosphatase

  descriptions from strain specific annotations:

  • dUTP pyrophosphatase
  • bacteriophage L54a deoxyuridine 5-triphosphate nucleotidohydrolase
  • dUTP diphosphatase
  • prophage L54a, deoxyuridine 5'-triphosphate nucleotidohydrolase
  • bacteriophage L54a, deoxyuridine 5-triphosphate nucleotidohydrolase
  • deoxyuridine 5'-triphosphate nucleotidohydrolase
  • putative dUTP pyrophosphatase
• strand^?: -
• coordinates^?: 1692283..1692795
• synteny block^?: BlockID0008950
• occurrence^?: in 27% of 33 strains

⊟Orthologs

COL:
SACOL0357 (dut)
N315:
—
NCTC8325:
SAOUHSC_01552
Newman:
—
USA300_FPR3757:
SAUSA300_1949 (dut)
04-02981:
—
08BA02176:
—
11819-97:
MS7_1480 (dut)
6850:
—
71193:
ST398NM01_2935
ECT-R 2:
—
ED133:
SAOV_1092
ED98:
SAAV_0845
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
SAMSHR1132_18150
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_1980 (dut)
VC40:
—

⊟Genome Viewer

COL
NCTC8325
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MTNTLQVKLLSKNARMPERNHKTDAGYDIFSAETVVLEPQEKAVIKTDVAVSIPEGYVGL
  NCTC8325        MTNTLQVKLLSKNARMPERNHKTDAGYDIFSAETVVLEPQEKAVIKTDVAVSIPEGYVGL
  USA300_FPR3757  MTNILQVKLLSENARMPERNHKTDAGYDIFSAETVVLEPQEKAVIKTDVAVSIPEGYVGL
                  *** *******:************************************************
  
  COL             LTSRSGVSSKTYLVIETGKIDAGYHGNLGINIKND------EERDGIPFLYDDIDAELED
  NCTC8325        LTSRSGVSSKTYLVIETGKIDAGYHGNLGINIKND------EERDGIPFLYDDIDAELED
  USA300_FPR3757  LTSRSGVSSKTHLVIETGKIDAGYHGNLGINIKNDNETLESEDMSNFGRSPAGIDGKYAR
                  ***********:***********************      *: ..:     .**.:   
  
  COL             GLIS--ILDIKGNYVQDGRGIRRVYQINKGDKLAQLVIVPIWTPELKQVEEFESVSERGA
  NCTC8325        GLIS--ILDIKGNYVQDGRGIRRVYQINKGDKLAQLVIVPIWTPELKQVEEFESVSERGA
  USA300_FPR3757  LPVTDKILCMNGSYV-----------INKGDKLAQLVIVPIWTPELKQVEEFESVSERGA
                    ::  ** ::*.**           **********************************
  
  COL             KGFGSSGV
  NCTC8325        KGFGSSGV
  USA300_FPR3757  KGFGSSGV
                  ********