From AureoWiki
Jump to: navigation, search

Summary[edit source | edit]

  • pan ID?: SAUPAN001994000
  • symbol?: xpt
  • description?: xanthine phosphoribosyltransferase

      descriptions from strain specific annotations:

    • xanthine phosphoribosyltransferase
    • putative xanthine phosphoribosyltransferase
  • strand?: +
  • coordinates?: 2458716..2459294
  • synteny block?: BlockID0013470
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0458 (xpt)
    N315:
    SA0373 (xprT)
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0386 (xprT)
    08BA02176:
    C248_0444 (xpt)
    11819-97:
    MS7_0377 (xpt)
    71193:
    ST398NM01_0465
    ECT-R 2:
    ECTR2_347 (xpt)
    ED133:
    SAOV_0410 (xpt)
    ED98:
    SAAV_0355 (xpt)
    HO 5096 0412:
    SAEMRSA15_03400 (xpt)
    JH1:
    SaurJH1_0446
    JH9:
    SaurJH9_0435
    JKD6008:
    SAA6008_00387 (xprT)
    JKD6159:
    SAA6159_00362 (xprT)
    LGA251:
    SARLGA251_03480 (xpt)
    M013:
    M013TW_0367
    MRSA252:
    SAR0406 (xpt)
    MSHR1132:
    SAMSHR1132_03590
    MSSA476:
    SAS0364
    Mu3:
    SAHV_0385 (xprT)
    Mu50:
    SAV0388 (xprT)
    MW2:
    MW0364 (xprT)
    RF122:
    SAB0338 (xpt)
    ST398:
    SAPIG0465 (xpt)
    T0131:
    SAT0131_00420 (ackA)
    TCH60:
    HMPREF0772_10106 (xpt)
    TW20:
    SATW20_04540 (xpt)
    USA300_TCH1516:
    USA300HOU_0411 (xprT)
    VC40:
    SAVC_01690

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MELLGQKVKEDGVVIDEKILKVDGFLNHQIDAKLMNEVGRTFYEQFKDKGITKILTIEAS
    N315            MELLGQKVKEDGVVIDEKILKVDGFLNHQIDAKLMNEVGRTFYEQFKDKGITKILTIEAS
    NCTC8325        MELLGQKVKEDGVVIDEKILKVDGFLNHQIDAKLMNEVGRTFYEQFKDKGITKILTIEAS
    Newman          MELLGQKVKEDGVVIDEKILKVDGFLNHQIDAKLMNEVGRTFYEQFKDKGITKILTIEAS
    USA300_FPR3757  MELLGQKVKEDGVVIDEKILKVDGFLNHQIDAKLMNEVGRTFYEQFKDKGITKILTIEAS
                    ************************************************************

    COL             GIAPAIMAALHFDVPCLFAKKAKPSTLTDGYYETSIHSFTKNKTSTVIVSKEFLSEEDTV
    N315            GIAPAIMAALHFDVPCLFAKKAKPSTLTDGYYETSIHSFTKNKTSTVIVSKEFLSEEDTV
    NCTC8325        GIAPAIMAALHFDVPCLFAKKAKPSTLTDGYYETSIHSFTKNKTSTVIVSKEFLSEEDTV
    Newman          GIAPAIMAALHFDVPCLFAKKAKPSTLTDGYYETSIHSFTKNKTSTVIVSKEFLSEEDTV
    USA300_FPR3757  GIAPAIMAALHFDVPCLFAKKAKPSTLTDGYYETSIHSFTKNKTSTVIVSKEFLSEEDTV
                    ************************************************************

    COL             LIIDDFLANGDASLGLYDIAQQANAKTAGIGIVVEKSFQNGHQRLEEAGLTVSSLCKVAS
    N315            LIIDDFLANGDASLGLYDIAQQANAKTAGIGIVVEKSFQNGHQRLEEAGLTVSSLCKVAS
    NCTC8325        LIIDDFLANGDASLGLYDIAQQANAKTAGIGIVVEKSFQNGHQRLEEAGLTVSSLCKVAS
    Newman          LIIDDFLANGDASLGLYDIAQQANAKTAGIGIVVEKSFQNGHQRLEEAGLTVSSLCKVAS
    USA300_FPR3757  LIIDDFLANGDASLGLYDIAQQANAKTAGIGIVVEKSFQNGHQRLEEAGLTVSSLCKVAS
                    ************************************************************

    COL             LEGNKVTLVGEE
    N315            LEGNKVTLVGEE
    NCTC8325        LEGNKVTLVGEE
    Newman          LEGNKVTLVGEE
    USA300_FPR3757  LEGNKVTLVGEE
                    ************