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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002150000
- symbol?: —
- synonym:
- description?: pseudogene
- strand?: +
- coordinates?: 2662394..2662727
- synteny block?: BlockID0014550
- occurrence?: in 94% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0424
08BA02176:
C248_0499
11819-97:
MS7_0422
6850:
RSAU_000378
71193:
ST398NM01_0515
ECT-R 2:
ECTR2_383
ED133:
SAOV_0462
ED98:
SAAV_0392
HO 5096 0412:
SAEMRSA15_03730
JH1:
SaurJH1_0483
JH9:
SaurJH9_0471
JKD6008:
SAA6008_00451
JKD6159:
SAA6159_00400
LGA251:
SARLGA251_03830
M013:
—
MRSA252:
SAR0448
MSHR1132:
—
MSSA476:
SAS0406
Mu3:
SAHV_0446
Mu50:
SAV0448
MW2:
MW0404
RF122:
SAB0399
ST398:
SAPIG0515
T0131:
SAT0131_00486
TCH60:
HMPREF0772_10074
TW20:
SATW20_05170
USA300_TCH1516:
USA300HOU_0450
VC40:
SAVC_01835
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTLIEPDMTLRMPDISTTVETLNLISKMEAQKENIRTVIAPEHKHKYKDIENGLKGEEKV
N315 MTLIEPDMNLRMPDISTTVETLNLISKMEAQKENIRSVIAPEHKHKYKDIENGLKGEEKV
NCTC8325 MTLIEPDMTLRMPDISTTVETLNLISKMEAQKENIRTVIAPEHKHKYKDIENGLKGEEKV
Newman MTLIEPDMTLRMPDISTTVETLNLISKMEAQKENIRTVIAPEHKHKYKDIENGLKGEEKV
USA300_FPR3757 MTLIEPDMTLRMPDISTTVETLNLISKMEAQKENIRTVIAPEHKHKYKDIENGLKGEEKV
********.***************************:***********************
COL LIEQMAQHCEAFKANFKGAAQGDWVKSAMSEIDSIKDDLKKINS
N315 LIEQMAQHCEAFKANFKGAAQGDWVKSAMSEIDSIKDDLKKINS
NCTC8325 LIEQMAQHCEAFKANFKGAAQGDWVKSAMSEIDSIKDDLKKINS
Newman LIEQMAQHCEAFKANFKGAAQGDWVKSAMSEIDSIKDDLKKINS
USA300_FPR3757 LIEQMAQHCEAFKANFKGAAQGDWVKSAMSEIDSIKDDLKKINS
********************************************