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Summary[edit source | edit]

  • pan ID?: SAUPAN002154000
  • symbol?:
  • description?: hypothetical protein
  • strand?: -
  • coordinates?: 2664726..2664920
  • synteny block?: BlockID0014580
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0425
    08BA02176:
    C248_0500
    11819-97:
    MS7_0423
    71193:
    ST398NM01_0516
    ECT-R 2:
    ECTR2_384
    ED133:
    SAOV_0465c
    ED98:
    SAAV_0393
    HO 5096 0412:
    SAEMRSA15_03740
    JH1:
    SaurJH1_0484
    JH9:
    SaurJH9_0472
    JKD6008:
    SAA6008_00452
    JKD6159:
    SAA6159_00401
    LGA251:
    SARLGA251_03840
    M013:
    M013TW_0412
    MRSA252:
    SAR0449
    MSHR1132:
    SAMSHR1132_03950
    MSSA476:
    SAS0407
    Mu3:
    SAHV_0447
    Mu50:
    SAV0449
    MW2:
    MW0405
    RF122:
    SAB0400c
    ST398:
    SAPIG0516
    T0131:
    SAT0131_00487
    TCH60:
    HMPREF0772_10073
    TW20:
    SATW20_05180
    USA300_TCH1516:
    USA300HOU_0451
    VC40:
    SAVC_01840

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MSALLYNGDKDISHERESRCINMLFVILVLYVTGIAFILLSVFGSKTEGLSTKHTLYTIG
    N315            --------------------MNMLFVILVLYVIGIAFILLSVFGSKTEGLSTKHTLYTIG
    NCTC8325        MSALLYNGDKDISHERESRCINMLFVILVLYVTGIAFILLSVFGSKTEGLSTKHTLYTIG
    Newman          ----------------------MLFVILVLYVTGIAFILLSVFGSKTEGLSTKHTLYTIG
    USA300_FPR3757  MSALLYNGDKDISHERESRCINMLFVILVLYVTGIAFILLSVFGSKTEGLSTKHTLYTIG
                                          ********** ***************************

    COL             SAIITIAIFISIGYAIQYLTAALYGL
    N315            SAIITIAIFISIGYAIQYLTAALYGL
    NCTC8325        SAIITIAIFISIGYAIQYLTAALYGL
    Newman          SAIITIAIFISIGYAIQYLTAALYGL
    USA300_FPR3757  SAIITIAIFISIGYAIQYLTAALYGL
                    **************************