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Summary[edit source | edit]

  • pan ID?: SAUPAN002243000
  • symbol?: pth
  • description?: peptidyl-tRNA hydrolase

      descriptions from strain specific annotations:

    • peptidyl-tRNA hydrolase
    • putative peptidyl-tRNA hydrolase
    • aminoacyl-tRNA hydrolase
  • strand?: +
  • coordinates?: 2748962..2749534
  • synteny block?: BlockID0015420
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0546 (pth)
    N315:
    SA0460 (pth)
    NCTC8325:
    Newman:
    NWMN_0465 (pth)
    USA300_FPR3757:
    04-02981:
    SA2981_0477 (pth)
    08BA02176:
    C248_0558
    11819-97:
    MS7_0479 (pth)
    71193:
    ST398NM01_0568
    ECT-R 2:
    ECTR2_442 (pth)
    ED133:
    SAOV_0524
    ED98:
    SAAV_0449 (pth)
    HO 5096 0412:
    SAEMRSA15_04280
    JH1:
    SaurJH1_0537
    JH9:
    SaurJH9_0524
    JKD6008:
    SAA6008_00507 (pth)
    JKD6159:
    SAA6159_00453 (pth)
    LGA251:
    SARLGA251_04360
    M013:
    M013TW_0474
    MRSA252:
    SAR0503
    MSHR1132:
    SAMSHR1132_04460
    MSSA476:
    SAS0459
    Mu3:
    SAHV_0499 (pth)
    Mu50:
    SAV0502 (pth)
    MW2:
    MW0457 (pth)
    RF122:
    SAB0451
    ST398:
    SAPIG0568 (pth)
    T0131:
    SAT0131_00548
    TCH60:
    HMPREF0772_10017 (pth)
    TW20:
    SATW20_05700
    USA300_TCH1516:
    USA300HOU_0496 (pth)
    VC40:
    SAVC_02095

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKGAYTIERMNGDKVLFIE
    N315            MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKGAYTIERMNGDKVLFIE
    NCTC8325        MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKGAYTIERMNGDKVLFIE
    Newman          MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKGAYTIERMNGDKVLFIE
    USA300_FPR3757  MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKGAYTIERMNGDKVLFIE
                    ************************************************************

    COL             PMTMMNLSGEAVAPIMDYYNVNPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKM
    N315            PMTMMNLSGEAVAPIMDYYNVNPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKM
    NCTC8325        PMTMMNLSGEAVAPIMDYYNVNPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKM
    Newman          PMTMMNLSGEAVAPIMDYYNVNPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKM
    USA300_FPR3757  PMTMMNLSGEAVAPIMDYYNVNPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKM
                    ************************************************************

    COL             LGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAARAIEKFVETSRFDH
    N315            LGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAARAIEKFVETSRFDH
    NCTC8325        LGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAARAIEKFVETSRFDH
    Newman          LGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAARAIEKFVETSRFDH
    USA300_FPR3757  LGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAARAIEKFVETSRFDH
                    ************************************************************

    COL             VMNEFNGEVK
    N315            VMNEFNGEVK
    NCTC8325        VMNEFNGEVK
    Newman          VMNEFNGEVK
    USA300_FPR3757  VMNEFNGEVK
                    **********