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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002287000
- symbol?: ctsR
- synonym:
- description?: transcriptional regulator CtsR
- transcriptional regulator CtsR
- CtsR family transcriptional regulator
- class III stress genes transcriptional repressor
- DNA-binding protein
- putative DNA-binding protein
- transcriptional repressor of stress genes
- transcription repressor of class III stress genes homologue
- transcription repressor of class III stress genes-like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2808630..2809100
- synteny block?: BlockID0015860
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0497 (ctsR)
08BA02176:
C248_0594
11819-97:
MS7_0511 (ctsR)
6850:
RSAU_000473 (ctsR)
71193:
ST398NM01_0597
ECT-R 2:
ECTR2_475
ED133:
SAOV_0557
ED98:
SAAV_0483 (ctsR)
HO 5096 0412:
SAEMRSA15_04480
JH1:
SaurJH1_0558
JH9:
SaurJH9_0544
JKD6008:
SAA6008_00528 (ctsR)
JKD6159:
SAA6159_00475 (ctsR)
LGA251:
SARLGA251_04570 (ctsR)
M013:
M013TW_0506
MRSA252:
SAR0525
MSHR1132:
SAMSHR1132_04660
MSSA476:
SAS0479
Mu3:
SAHV_0519 (ctsR)
Mu50:
SAV0522 (ctsR)
MW2:
MW0477 (ctsR)
RF122:
SAB0472
ST398:
SAPIG0597
T0131:
SAT0131_00572
TCH60:
HMPREF0772_12669 (ctsR)
TW20:
SATW20_05910 (ctsR)
USA300_TCH1516:
USA300HOU_0515 (ctsR)
VC40:
SAVC_02195
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIES
N315 MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIES
NCTC8325 MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIES
Newman MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIES
USA300_FPR3757 MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIES
************************************************************
COL KRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQ
N315 KRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQ
NCTC8325 KRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQ
Newman KRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQ
USA300_FPR3757 KRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQ
************************************************************
COL AVIDRETLSMDMVSRDIIRANILKRLLPVINYY
N315 AVIDRETLSMDMVSRDIIRANILKRLLPVINYY
NCTC8325 AVIDRETLSMDMVSRDIIRANILKRLLPVINYY
Newman AVIDRETLSMDMVSRDIIRANILKRLLPVINYY
USA300_FPR3757 AVIDRETLSMDMVSRDIIRANILKRLLPVINYY
*********************************