PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002316000
• symbol^?: rplGB
• synonym:
• description^?: 50S ribosomal protein L7ae-like protein

  descriptions from strain specific annotations:

  • 50S ribosomal protein L7ae-like protein
  • putative ribosomal protein L7Ae-like
  • ribosomal protein L7Ae-like
  • ribosomal protein L7Ae/L30e/S12e/Gadd45
  • 50S ribosomal protein L7/L12
  • 50S ribosomal protein L7AE
  • Firmicutes ribosomal L7Ae family protein
  • Large subunit ribosomal protein L7A
  • putative ribosomal protein L7Ae-like protein
  • ribosomal L7Ae/L30e/S12e/Gadd45 family protein
• strand^?: +
• coordinates^?: 2835095..2835406
• synteny block^?: BlockID0016150
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0590
N315:
SA0502
NCTC8325:
SAOUHSC_00526
Newman:
NWMN_0506
USA300_FPR3757:
SAUSA300_0529
04-02981:
SA2981_0521
08BA02176:
C248_0619
11819-97:
MS7_0534
6850:
RSAU_000496
71193:
ST398NM01_0619
ECT-R 2:
ECTR2_498
ED133:
SAOV_0579
ED98:
SAAV_0507
HO 5096 0412:
SAEMRSA15_04710
JH1:
SaurJH1_0581
JH9:
SaurJH9_0567
JKD6008:
SAA6008_00550
JKD6159:
SAA6159_00498
LGA251:
SARLGA251_04800
M013:
M013TW_0531
MRSA252:
SAR0549
MSHR1132:
SAMSHR1132_04880
MSSA476:
SAS0502
Mu3:
SAHV_0542
Mu50:
SAV0544
MW2:
MW0499
RF122:
SAB0495
ST398:
SAPIG0619
T0131:
SAT0131_00597
TCH60:
HMPREF0772_12645 (rplL3)
TW20:
SATW20_06140
USA300_TCH1516:
USA300HOU_0538
VC40:
SAVC_02310

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MSKEKVARFNKQHFVVGLKETLKALKKDQVTSLIIAEDVEVYLMTRVLSQINQKNIPVSF
  N315            MSKEKVARFNKQHFVVGLKETLKALKKDQVTSLIIAEDVEVYLMTRVLSQINQKNIPVSF
  NCTC8325        MSKEKVARFNKQHFVVGLKETLKALKKDQVTSLIIAEDVEVYLMTRVLSQINQKNIPVSF
  Newman          MSKEKVARFNKQHFVVGLKETLKALKKDQVTSLIIAEDVEVYLMTRVLSQINQKNIPVSF
  USA300_FPR3757  MSKEKVARFNKQHFVVGLKETLKALKKDQVTSLIIAEDVEVYLMTRVLSQINQKNIPVSF
                  ************************************************************
  
  COL             FKSKHALGKHVGINVNATIVALIK
  N315            FKSKHALGKHVGINVNATIVALIK
  NCTC8325        FKSKHALGKHVGINVNATIVALIK
  Newman          FKSKHALGKHVGINVNATIVALIK
  USA300_FPR3757  FKSKHALGKHVGINVNATIVALIK
                  ************************