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Summary[edit source | edit]

  • pan ID?: SAUPAN002346000
  • symbol?: nagB
  • description?: glucosamine-6-phosphate isomerase

      descriptions from strain specific annotations:

    • glucosamine-6-phosphate isomerase
    • glucosamine-6-phosphate deaminase
    • glucosamine-6-phosphate deaminase 1 (Glucosamine-6-phosphate isomerase 1) (GNPDA 1) (GlcN6P deaminase 1)
    • glucosamine/galactosamine-6-phosphate isomerase
    • glucosamine/galactosamine-6-phosphate isomerase, NagB
    • putative glucosamine-6-phosphate isomerase
  • strand?: +
  • coordinates?: 2885892..2886650
  • synteny block?: BlockID0016450
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0616 (nagB)
    N315:
    SA0527 (nagB)
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0546 (nagB)
    08BA02176:
    C248_0644
    11819-97:
    MS7_0559 (nagB)
    71193:
    ST398NM01_0644
    ECT-R 2:
    ECTR2_523
    ED133:
    SAOV_0604
    ED98:
    SAAV_0532 (nagB)
    HO 5096 0412:
    SAEMRSA15_04960
    JH1:
    SaurJH1_0606
    JH9:
    SaurJH9_0592
    JKD6008:
    SAA6008_00577 (nagB)
    JKD6159:
    SAA6159_00523 (nagB)
    LGA251:
    SARLGA251_05050
    M013:
    M013TW_0557
    MRSA252:
    SAR0573
    MSHR1132:
    SAMSHR1132_05130
    MSSA476:
    SAS0527
    Mu3:
    SAHV_0567 (nagB)
    Mu50:
    SAV0569 (nagB)
    MW2:
    MW0524 (nagB)
    RF122:
    SAB0519
    ST398:
    SAPIG0644
    T0131:
    SAT0131_00630
    TCH60:
    HMPREF0772_12619 (nagB)
    TW20:
    SATW20_06390
    USA300_TCH1516:
    USA300HOU_0563 (nagB)
    VC40:
    SAVC_02435

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDN
    N315            MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDN
    NCTC8325        MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDN
    Newman          MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDN
    USA300_FPR3757  MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDN
                    ************************************************************

    COL             VSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDV
    N315            VSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDV
    NCTC8325        VSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDV
    Newman          VSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDV
    USA300_FPR3757  VSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDV
                    ************************************************************

    COL             LEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQA
    N315            LEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQA
    NCTC8325        LEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQA
    Newman          LEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQA
    USA300_FPR3757  LEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQA
                    ************************************************************

    COL             ISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACP
    N315            ISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACP
    NCTC8325        ISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACP
    Newman          ISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACP
    USA300_FPR3757  ISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACP
                    ************************************************************

    COL             KNVAKIHVDEMD
    N315            KNVAKIHVDEMD
    NCTC8325        KNVAKIHVDEMD
    Newman          KNVAKIHVDEMD
    USA300_FPR3757  KNVAKIHVDEMD
                    ************