Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN002472000
- symbol?: —
- synonym:
- description?: DUF1934 family protein
- DUF1934 family protein
- hypothetical protein with DUF1934
- domain of unknown function
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2986911..2987339
- synteny block?: BlockID0017080
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0583
08BA02176:
C248_0690
11819-97:
MS7_0659
6850:
RSAU_000563
71193:
ST398NM01_0687
ECT-R 2:
ECTR2_559
ED133:
SAOV_0642
ED98:
SAAV_0570
HO 5096 0412:
SAEMRSA15_05340
JH1:
SaurJH1_0644
JH9:
SaurJH9_0629
JKD6008:
SAA6008_00624
JKD6159:
SAA6159_00563
LGA251:
SARLGA251_05420
M013:
M013TW_0595
MRSA252:
SAR0614
MSHR1132:
SAMSHR1132_05500
MSSA476:
SAS0574
Mu3:
SAHV_0604
Mu50:
SAV0606
MW2:
MW0570
RF122:
SAB0558
ST398:
SAPIG0687
T0131:
SAT0131_00673
TCH60:
HMPREF0772_12580
TW20:
SATW20_06830
USA300_TCH1516:
USA300HOU_0612
VC40:
SAVC_02675
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSSKLDKKVSIQTKQVLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQIEDATVNVTIKVD
N315 MSSKLDKKVSIQTKQVLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQIEDATVNVTIKVD
NCTC8325 ---------------MLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQIEDATVNVTIKVD
Newman MSSKLDKKVSIQTKQVLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQIEDATVNVTIKVD
USA300_FPR3757 ---------------MLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQIEDATVNVTIKVD
:********************************************
COL DDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILHFVSGDGGKLKIHYE
N315 DDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILHFVSGDGGKLKIHYE
NCTC8325 DDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILHFVSGDGGKLKIHYE
Newman DDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILHFVSGDGGKLKIHYE
USA300_FPR3757 DDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILHFVSGDGGKLKIHYE
************************************************************
COL LYQDNEKMGSYQYEINYKEIGE
N315 LYQDNEKMGSYQYEINYKEIGE
NCTC8325 LYQDNEKMGSYQYEINYKEIGE
Newman LYQDNEKMGSYQYEINYKEIGE
USA300_FPR3757 LYQDNEKMGSYQYEINYKEIGE
**********************