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Summary[edit source | edit]

  • pan ID?: SAUPAN002473000
  • symbol?: argS
  • description?: arginyl-tRNA synthetase

      descriptions from strain specific annotations:

    • arginyl-tRNA synthetase
    • arginine--tRNA ligase
    • putative arginyl-tRNA synthetase
  • strand?: +
  • coordinates?: 2987336..2988997
  • synteny block?: BlockID0017090
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0663 (argS)
    N315:
    SA0564 (argS)
    NCTC8325:
    Newman:
    NWMN_0579 (argS)
    USA300_FPR3757:
    04-02981:
    SA2981_0584 (argS)
    08BA02176:
    C248_0691 (argS)
    11819-97:
    MS7_0660 (argS)
    71193:
    ST398NM01_0688
    ECT-R 2:
    ECTR2_560 (argS)
    ED133:
    SAOV_0643
    ED98:
    SAAV_0571 (argS)
    HO 5096 0412:
    SAEMRSA15_05350 (argS)
    JH1:
    SaurJH1_0645 (argS)
    JH9:
    SaurJH9_0630 (argS)
    JKD6008:
    SAA6008_00625 (argS)
    JKD6159:
    SAA6159_00564 (argS)
    LGA251:
    SARLGA251_05430 (argS)
    M013:
    M013TW_0596
    MRSA252:
    SAR0615 (argS)
    MSHR1132:
    SAMSHR1132_05510
    MSSA476:
    SAS0575 (argS)
    Mu3:
    SAHV_0605 (argS)
    Mu50:
    SAV0607 (argS)
    MW2:
    MW0571 (argS)
    RF122:
    SAB0559 (argS)
    ST398:
    SAPIG0688 (argS)
    T0131:
    SAT0131_00674
    TCH60:
    HMPREF0772_12579 (argS)
    TW20:
    SATW20_06840 (argS)
    USA300_TCH1516:
    USA300HOU_0613 (argS)
    VC40:
    SAVC_02680 (argS)

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDYATNIAMVLTKIAKRNP
    N315            MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDYATNIAMVLTKIAKRNP
    NCTC8325        MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDYATNIAMVLTKIAKRNP
    Newman          MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDYATNIAMVLTKIAKRNP
    USA300_FPR3757  MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDYATNIAMVLTKIAKRNP
                    ************************************************************

    COL             REIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESKG
    N315            REIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESKG
    NCTC8325        REIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESKG
    Newman          REIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESKG
    USA300_FPR3757  REIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESKG
                    ************************************************************

    COL             QNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLARS
    N315            QNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLARS
    NCTC8325        QNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLARS
    Newman          QNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLARS
    USA300_FPR3757  QNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLARS
                    ************************************************************

    COL             IETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHPEIKDYSEEARLKEFRKLGVEYE
    N315            IETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHPEIKDYSEEARLKEFRKLGVEYE
    NCTC8325        IETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHPEIKDYSEEARLKEFRKLGVEYE
    Newman          IETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHPEIKDYSEEARLKEFRKLGVEYE
    USA300_FPR3757  IETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHPEIKDYSEEARLKEFRKLGVEYE
                    ************************************************************

    COL             MAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAKMKELGYTYEADGATWLRTTDFKDD
    N315            MAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAKMKELGYTYEADGATWLRTTDFKDD
    NCTC8325        MAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAKMKELGYTYEADGATWLRTTDFKDD
    Newman          MAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAKMKELGYTYEADGATWLRTTDFKDD
    USA300_FPR3757  MAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAKMKELGYTYEADGATWLRTTDFKDD
                    ************************************************************

    COL             KDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSN
    N315            KDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSN
    NCTC8325        KDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSN
    Newman          KDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSN
    USA300_FPR3757  KDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSN
                    ************************************************************

    COL             RLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDM
    N315            RLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDM
    NCTC8325        RLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDM
    Newman          RLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDM
    USA300_FPR3757  RLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDM
                    ************************************************************

    COL             ELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAANDFTTITNEKAIELLKKVADF
    N315            ELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAANDFTTITNEKAIELLKKVADF
    NCTC8325        ELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAANDFTTITNEKAIELLKKVADF
    Newman          ELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAANDFTTITNEKAIELLKKVADF
    USA300_FPR3757  ELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAANDFTTITNEKAIELLKKVADF
                    ************************************************************

    COL             EPTIESAAEHRSAHRITNYIQDLASHFHKFYNAEKVLTDDIEKTKAHVAMIEAVRITLKN
    N315            EPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEKVLTDDIEKTKAHVAMIEAVRITLKN
    NCTC8325        EPTIESAAEHRSAHRITNYIQDLASHFHKFYNAEKVLTDDIEKTKAHVAMIEAVRITLKN
    Newman          EPTIESAAEHRSAHRITNYIQDLASHFHKFYNAEKVLTDDIEKTKAHVAMIEAVRITLKN
    USA300_FPR3757  EPTIESAAEHRSAHRITNYIQDLASHFHKFYNAEKVLTDDIEKTKAHVAMIEAVRITLKN
                    ************************:***********************************

    COL             ALAMVGVSAPESM
    N315            ALAMVGVSAPESM
    NCTC8325        ALAMVGVSAPESM
    Newman          ALAMVGVSAPESM
    USA300_FPR3757  ALAMVGVSAPESM
                    *************