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Summary[edit source | edit]

  • pan ID?: SAUPAN002537000
  • symbol?: graX
  • description?: NAD(P)-dependent oxidoreductase

      descriptions from strain specific annotations:

    • NAD(P)-dependent oxidoreductase
    • NADH dehydrogenase
  • strand?: +
  • coordinates?: 3048206..3048979
  • synteny block?: BlockID0017730
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0634
    08BA02176:
    C248_0742
    11819-97:
    MS7_0708
    71193:
    ST398NM01_0736
    ECT-R 2:
    ECTR2_609
    ED133:
    SAOV_0692
    ED98:
    SAAV_0620
    HO 5096 0412:
    SAEMRSA15_05840
    JH1:
    SaurJH1_0696
    JH9:
    SaurJH9_0681
    JKD6008:
    SAA6008_00674
    JKD6159:
    SAA6159_00612
    LGA251:
    SARLGA251_05910
    M013:
    M013TW_0645
    MRSA252:
    SAR0668
    MSHR1132:
    SAMSHR1132_06040
    MSSA476:
    SAS0623
    Mu3:
    SAHV_0655
    Mu50:
    SAV0658
    MW2:
    MW0620
    RF122:
    SAB0607
    ST398:
    SAPIG0736
    T0131:
    SAT0131_00728
    TCH60:
    HMPREF0772_12530
    TW20:
    SATW20_07330
    USA300_TCH1516:
    USA300HOU_0679
    VC40:
    SAVC_02920

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKPKVLLAGGTGYIGKYLSEVIENDAELFAISKYPDNKKTDDVEMTWIQCDIFHYEQVVA
    N315            MKPKVLLAGGTGYIGKYLSEVIENDAELFTISKYPDNKKTDDVEMTWIQCDIFHYEQVVA
    NCTC8325        MKPKVLLAGGTGYIGKYLSEVIENDAELFAISKYPDNKKTDDVEMTWIQCDIFHYEQVVA
    Newman          MKPKVLLAGGTGYIGKYLSEVIENDAELFAISKYPDNKKTDDVEMTWIQCDIFHYEQVVA
    USA300_FPR3757  MKPKVLLAGGTGYIGKYLSEVIENDAELFAISKYPDNKKTDDVEMTWIQCDIFHYEQVVA
                    *****************************:******************************

    COL             AMNQIDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAAINQVKKVIYIPGSRYDNE
    N315            AMNQIDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAAINQVKKVIYIPGSRYDNE
    NCTC8325        AMNQIDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAAINQVKKVIYIPGSRYDNE
    Newman          AMNQIDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAAINQVKKVIYIPGSRYDNE
    USA300_FPR3757  AMNQIDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAAINQVKKVIYIPGSRYDNE
                    ************************************************************

    COL             TIERLGAYGTPVETTNLVFKRSLVNVELQVSKYDDVRSTMKVVLPKGWTLKNVVNHFIAW
    N315            TIERLGAYGTPVETTNLVFKRSLVNVELQVSKYDDVRSTMKVVLPKGWTLKNVVNHFIAW
    NCTC8325        TIERLGAYGTPVETTNLVFKRSLVNVELQVSKYDDVRSTMKVVLPKGWTLKNVVNHFIAW
    Newman          TIERLGAYGTPVETTNLVFKRSLVNVELQVSKYDDVRSTMKVVLPKGWTLKNVVNHFIAW
    USA300_FPR3757  TIERLGAYGTPVETTNLVFKRSLVNVELQVSKYDDVRSTMKVVLPKGWTLKNVVNHFIAW
                    ************************************************************

    COL             MGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIEETADGIITLILLSGSLVKKYTVNQG
    N315            MGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIEETADGIITLILLSGSLVKKYTVNQG
    NCTC8325        MGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIEETADGIITLILLSGSLVKKYTVNQG
    Newman          MGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIEETADGIITLILLSGSLVKKYTVNQG
    USA300_FPR3757  MGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIEETADGIITLILLSGSLVKKYTVNQG
                    ************************************************************

    COL             KLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPMQKMMIHGFEVDCRIKDFQSRLKSG
    N315            KLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPMQKMMIHGFEVDCRIKDFQSRLKSG
    NCTC8325        KLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPMQKMMIHGFEVDCRIKDFQSRLKSG
    Newman          KLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPMQKMMIHGFEVDCRIKDFQSRLKSG
    USA300_FPR3757  KLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPMQKMMIHGFEVDCRIKDFQSRLKSG
                    ************************************************************

    COL             ENMKYTK
    N315            ENMKYTK
    NCTC8325        ENMKYTK
    Newman          ENMKYTK
    USA300_FPR3757  ENMKYTK
                    *******