⊟Summary[edit | edit source]

pan ID^?: SAUPAN002630000
symbol^?: nrdE
synonym:
description^?: ribonucleotide-diphosphate reductase subunit alpha
- ribonucleotide-diphosphate reductase subunit alpha
- class 1b ribonucleoside-diphosphate reductase subunit alpha
- ribonucleotide-diphosphate reductase, alpha subunit
- Ribonucleotide reductase of class Ib (aerobic), alpha subunit
- ribonucleoside-diphosphate reductase, alpha subunit
- Ribonucleoside-diphosphate reductase, large chain
- ribonucleoside-diphosphate reductase alphachain
- ribonucleoside-diphosphate reductase subunit alpha
strand^?: +
coordinates^?: 3133191..3135356
synteny block^?: BlockID0018650
occurrence^?: in 100% of 33 strains

⊟Orthologs[edit | edit source]

COL:

SACOL0792 (nrdE)

N315:

SA0686 (nrdE)

NCTC8325:

SAOUHSC_00742

Newman:

NWMN_0700 (nrdE)

USA300_FPR3757:

SAUSA300_0716

04-02981:

SA2981_0709 (nrdE)

08BA02176:

C248_0818 (nrdE)

11819-97:

MS7_0782

6850:

RSAU_000706 (nrdE)

71193:

ST398NM01_0808

ECT-R 2:

ECTR2_681

ED133:

SAOV_0767

ED98:

SAAV_0693 (nrdE)

HO 5096 0412:

SAEMRSA15_06570 (rir1)

JH1:

SaurJH1_0772

JH9:

SaurJH9_0755

JKD6008:

SAA6008_00746 (nrdE)

JKD6159:

SAA6159_00686 (nrdE)

LGA251:

SARLGA251_06640 (rir1)

M013:

M013TW_0717

MRSA252:

SAR0785 (rir1)

MSHR1132:

SAMSHR1132_06760

MSSA476:

SAS0696

Mu3:

SAHV_0728 (nrdE)

Mu50:

SAV0731 (nrdE)

MW2:

MW0693 (nrdE)

RF122:

SAB0682 (rir1)

ST398:

SAPIG0808

T0131:

SAT0131_00801

TCH60:

HMPREF0772_12453 (nrdE)

TW20:

SATW20_08060 (rir1)

USA300_TCH1516:

USA300HOU_0755 (nrdE)

VC40:

SAVC_03290

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.307)

COL             --------------------MKTMEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYL
N315            ---MEKTKTLLNLRTRWVILMKTMEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYL
NCTC8325        MSYMEKTKTLLNLRTRWVILMKTMEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYL
Newman          ---MEKTKTLLNLRTRWVILMKTMEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYL
USA300_FPR3757  --------------------MKTMEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYL
                                    ****************************************

COL             EEVKDKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIEITDYAKSIPFNFASYMSASK
N315            EEVKDKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIEITDYAKSISFNFASYMSASK
NCTC8325        EEVKDKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIEITDYAKSIPFNFASYMSASK
Newman          EEVKDKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIEITDYAKSIPFNFASYMSASK
USA300_FPR3757  EEVKDKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIEITDYAKSIPFNFASYMSASK
                ************************************************.***********

COL             FFKDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNA
N315            FFKDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNA
NCTC8325        FFKDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNA
Newman          FFKDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNA
USA300_FPR3757  FFKDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNA
                ************************************************************

COL             GRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGV
N315            GRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGV
NCTC8325        GRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGV
Newman          GRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGV
USA300_FPR3757  GRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGV
                ************************************************************

COL             AKGVLPIAKSLEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTIS
N315            AKGVLPIAKSLEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTIS
NCTC8325        AKGVLPIAKSLEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTIS
Newman          AKGVLPIAKSLEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTIS
USA300_FPR3757  AKGVLPIAKSLEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTIS
                ************************************************************

COL             TGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDLEKYYDDMVANPNVEKKKKNA
N315            TGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDLEKYYDDMVANPNVEKKKKNA
NCTC8325        TGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDLEKYYDDMVANPNVEKKKKNA
Newman          TGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDLEKYYDDMVANPNVEKKKKNA
USA300_FPR3757  TGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDLEKYYDDMVANPNVEKKKKNA
                ************************************************************

COL             REMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQETSIINDYGI
N315            REMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQETSIINDYGI
NCTC8325        REMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQETSIINDYGI
Newman          REMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQETSIINDYGI
USA300_FPR3757  REMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQETSIINDYGI
                ************************************************************

COL             EDEIKRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAPGVRKANSELH
N315            EDEIKRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAPGVRKANSELH
NCTC8325        EDEIKRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAPGVRKANSELH
Newman          EDEIKRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAPGVRKANSELH
USA300_FPR3757  EDEIKRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAPGVRKANSELH
                ************************************************************

COL             SVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNFYSIERSMEIAKERGIKYQDFEK
N315            SVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNFYSIERSMEIAKERGIKYQDFEK
NCTC8325        SVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNFYSIERSMEIAKERGIKYQDFEK
Newman          SVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNFYSIERSMEIAKERGIKYQDFEK
USA300_FPR3757  SVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNFYSIERSMEIAKERGIKYQDFEK
                ************************************************************

COL             SDYANGKYFEFYTTQEFEPQFEKVRELFDGMAIPTSEDWKKLQQDVEQYGLYHAYRLAIA
N315            SDYANGKYFEFYTTQEFEPQFEKVRELFDGMAIPTSEDWKKLQQDVEQYGLYHAYRLAIA
NCTC8325        SDYANGKYFEFYTTQEFEPQFEKVRELFDGMAIPTSEDWKKLQQDVEQYGLYHAYRLAIA
Newman          SDYANGKYFEFYTTQEFEPQFEKVRELFDGMAIPTSEDWKKLQQDVEQYGLYHAYRLAIA
USA300_FPR3757  SDYANGKYFEFYTTQEFEPQFEKVRELFDGMAIPTSEDWKKLQQDVEQYGLYHAYRLAIA
                ************************************************************

COL             PTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTMWYYKSAFNTDQMKLID
N315            PTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTMWYYKSAFNTDQMKLID
NCTC8325        PTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTMWYYKSAFNTDQMKLID
Newman          PTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTMWYYKSAFNTDQMKLID
USA300_FPR3757  PTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTMWYYKSAFNTDQMKLID
                ************************************************************

COL             LIATIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKSLYYTRNKLLSVEECTSCS
N315            LIATIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKSLYYTRNKLLSVEECTSCS
NCTC8325        LIATIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKSLYYTRNKLLSVEECTSCS
Newman          LIATIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKSLYYTRNKLLSVEECTSCS
USA300_FPR3757  LIATIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKSLYYTRNKLLSVEECTSCS
                ************************************************************

COL             I
N315            I
NCTC8325        I
Newman          I
USA300_FPR3757  I
                *

Navigation menu

Contents

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Search

Navigation menu

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]