PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002695000
• symbol^?: clpP
• synonym:
• description^?: ATP-dependent Clp protease proteolytic subunit

  descriptions from strain specific annotations:

  • ATP-dependent Clp protease proteolytic subunit
  • ATP-dependent Clp endopeptidase proteolytic subunit ClpP
  • ATP-dependent Clp protease, proteolytic subunit ClpP
  • ATP-dependent endopeptidase clp proteolytic subunit
  • putative ATP-dependent Clp protease proteolyticsubunit
• strand^?: +
• coordinates^?: 3187331..3187918
• synteny block^?: BlockID0019270
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0833 (clpP)
N315:
SA0723 (clpP)
NCTC8325:
SAOUHSC_00790 (clpP)
Newman:
NWMN_0736 (clpP)
USA300_FPR3757:
SAUSA300_0752 (clpP)
04-02981:
SA2981_0746 (clpP)
08BA02176:
C248_0857 (clpP)
11819-97:
MS7_0819 (clpP)
6850:
RSAU_000744 (clpP)
71193:
ST398NM01_0846
ECT-R 2:
ECTR2_719 (clpP)
ED133:
SAOV_0807
ED98:
SAAV_0733 (clpP)
HO 5096 0412:
SAEMRSA15_06940 (clpP)
JH1:
SaurJH1_0809 (clpP)
JH9:
SaurJH9_0793 (clpP)
JKD6008:
SAA6008_00783 (clpP)
JKD6159:
SAA6159_00725 (clpP)
LGA251:
SARLGA251_07010 (clpP)
M013:
M013TW_0758
MRSA252:
SAR0823 (clpP)
MSHR1132:
SAMSHR1132_07130
MSSA476:
SAS0733 (clpP)
Mu3:
SAHV_0765 (clpP)
Mu50:
SAV0768 (clpP)
MW2:
MW0730 (clpP)
RF122:
SAB0722 (clpP)
ST398:
SAPIG0846 (clpP)
T0131:
SAT0131_00840
TCH60:
HMPREF0772_12412 (clpP)
TW20:
SATW20_08430 (clpP)
USA300_TCH1516:
USA300HOU_0797 (clpP)
VC40:
SAVC_03485 (clpP)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDI
  N315            MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDI
  NCTC8325        MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDI
  Newman          MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDI
  USA300_FPR3757  MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDI
                  ************************************************************
  
  COL             YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV
  N315            YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV
  NCTC8325        YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV
  Newman          YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV
  USA300_FPR3757  YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV
                  ************************************************************
  
  COL             MIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEA
  N315            MIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEA
  NCTC8325        MIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEA
  Newman          MIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEA
  USA300_FPR3757  MIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEA
                  ************************************************************
  
  COL             KEYGLIDEVMVPETK
  N315            KEYGLIDEVMVPETK
  NCTC8325        KEYGLIDEVMVPETK
  Newman          KEYGLIDEVMVPETK
  USA300_FPR3757  KEYGLIDEVMVPETK
                  ***************