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Summary[edit source | edit]

  • pan ID?: SAUPAN003074000
  • symbol?: spsB
  • description?: type-1 signal peptidase 1B

      descriptions from strain specific annotations:

    • type-1 signal peptidase 1B
    • signal peptidase Ib
    • Signal peptidase I
    • type I general secretory pathway signal peptidase I
    • Sec family Type I general secretory pathway S26 family signal peptidase I
    • type-I signal peptidase
  • strand?: +
  • coordinates?: 3460193..3460777
  • synteny block?: BlockID0021820
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0969 (spsB)
    N315:
    SA0826 (spsB)
    NCTC8325:
    Newman:
    NWMN_0836 (spsB)
    USA300_FPR3757:
    04-02981:
    SA2981_0920 (spsB)
    08BA02176:
    C248_0966 (spsB)
    11819-97:
    MS7_0920
    71193:
    ST398NM01_0948
    ECT-R 2:
    ECTR2_821 (lepB)
    ED133:
    SAOV_0912
    ED98:
    SAAV_0926 (spsB)
    HO 5096 0412:
    SAEMRSA15_07950 (spsB)
    JH1:
    SaurJH1_0984
    JH9:
    SaurJH9_0965
    JKD6008:
    SAA6008_00918
    JKD6159:
    SAA6159_00824
    LGA251:
    SARLGA251_08830 (spsB)
    M013:
    M013TW_0884
    MRSA252:
    SAR0927 (spsB)
    MSHR1132:
    SAMSHR1132_08170
    MSSA476:
    SAS0835
    Mu3:
    SAHV_0960 (spsB)
    Mu50:
    SAV0965 (spsB)
    MW2:
    MW0847 (spsB)
    RF122:
    SAB0834 (spsB)
    ST398:
    SAPIG0948 (lepB)
    T0131:
    SAT0131_00998
    TCH60:
    HMPREF0772_12281 (spsB)
    TW20:
    SATW20_09650 (spsB)
    USA300_TCH1516:
    USA300HOU_0924 (spsB)
    VC40:
    SAVC_04000

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MSKLKKEILEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIVGYKTG
    N315            ---MKKELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTG
    NCTC8325        ---------------------------------------MDPTLKDGERVAVNIVGYKTG
    Newman          ---MKKEILEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIVGYKTG
    USA300_FPR3757  ---------------------------------------MDPTLKDGERVAVNIVGYKTG
                                                           ***************:*****

    COL             GLEKGNVVVFHANKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDY
    N315            GLEKGNVVVFHANKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDY
    NCTC8325        GLEKGNVVVFHANKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDY
    Newman          GLEKGNVVVFHANKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDY
    USA300_FPR3757  GLEKGNVVVFHANKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDY
                    ************************************************************

    COL             ITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPF
    N315            ITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPF
    NCTC8325        ITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPF
    Newman          ITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPF
    USA300_FPR3757  ITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPF
                    ************************************************************

    COL             SEFKHNFNPENTKN
    N315            SEFKHNFNPENTKN
    NCTC8325        SEFKHNFNPENTKN
    Newman          SEFKHNFNPENTKN
    USA300_FPR3757  SEFKHNFNPENTKN
                    **************