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Pangenome04-0298108BA0217611819-9771193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40

Summary[edit source | edit]

  • pan ID?: SAUPAN003220000
  • symbol?:
  • description?: pseudogene

      descriptions from strain specific annotations:

    • pseudogene
    • putative bacteriocin
    • bacteriocin, lactococcin 972 family
    • putative bacteriocin precursor
  • strand?: +
  • coordinates?: 3605142..3605445
  • synteny block?: BlockID0023060
  • occurrence?: in 59% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0985
    08BA02176:
    C248_1055
    11819-97:
    71193:
    ST398NM01_1028
    ECT-R 2:
    ED133:
    SAOV_0976
    ED98:
    HO 5096 0412:
    SAEMRSA15_08610
    JH1:
    SaurJH1_1112
    JH9:
    SaurJH9_1090
    JKD6008:
    JKD6159:
    LGA251:
    SARLGA251_09450
    M013:
    M013TW_0960
    MRSA252:
    SAR1001
    MSHR1132:
    SAMSHR1132_08780
    MSSA476:
    SAS0964
    Mu3:
    SAHV_1025
    Mu50:
    SAV1032
    MW2:
    MW0912
    RF122:
    SAB0895
    ST398:
    SAPIG1028
    T0131:
    TCH60:
    TW20:
    SATW20_10270
    USA300_TCH1516:
    VC40:

Genome Viewer[edit source | edit]

Alignments[edit source | edit]

  • alignment of orthologues: