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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003313000
- symbol?: rpoY
- synonym:
- description?: DNA-dependent RNA polymerase auxiliary subunit epsilon family protein
- DNA-dependent RNA polymerase auxiliary subunit epsilon family protein
- putative DUF1447-containing protein
- transcriptional regulator
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3681950..3682120
- synteny block?: BlockID0023970
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1047
08BA02176:
C248_1116
11819-97:
MS7_1047
6850:
RSAU_000975
71193:
ST398NM01_1087
ECT-R 2:
ECTR2_945
ED133:
SAOV_1034c
ED98:
SAAV_1055
HO 5096 0412:
SAEMRSA15_09200
JH1:
SaurJH1_1172
JH9:
SaurJH9_1150
JKD6008:
SAA6008_01045 (esaB)
JKD6159:
SAA6159_00946 (esaB)
LGA251:
SARLGA251_10030
M013:
M013TW_1022
MRSA252:
SAR1064
MSHR1132:
SAMSHR1132_09370
MSSA476:
SAS1025
Mu3:
SAHV_1082
Mu50:
SAV1090
MW2:
MW0973
RF122:
SAB0956c
ST398:
SAPIG1087
T0131:
SAT0131_01127
TCH60:
HMPREF0772_12142
TW20:
SATW20_10850
USA300_TCH1516:
USA300HOU_1032
VC40:
SAVC_04610
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAVFKVFYQHNRDEVIVRENTQSLYVEAQTEEQVRRYLKDRNFNIEFITKLEGAHLDYEK
N315 MAVFKVFYQHNRDEVIVRENTQSLYVEAQTEEQVRRYLKDRNFNIEFITKLEGAHLDYEK
NCTC8325 MAVFKVFYQHNRDEVIVRENTQSLYVEAQTEEQVRRYLKDRNFNIEFITKLEGAHLDYEK
USA300_FPR3757 MAVFKVFYQHNRDEVIVRENTQSLYVEAQTEEQVRRYLKDRNFNIEFITKLEGAHLDYEK
************************************************************
COL ENSEHFNVEIAK
N315 ENSEHFNVEIAK
NCTC8325 ENSEHFNVEIAK
USA300_FPR3757 ENSEHFNVEIAK
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