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Summary[edit source | edit]

  • pan ID?: SAUPAN003313000
  • symbol?: rpoY
  • description?: transcriptional regulator
  • strand?: -
  • coordinates?: 3681950..3682120
  • synteny block?: BlockID0023970
  • occurrence?: in 97% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1047
    08BA02176:
    C248_1116
    11819-97:
    MS7_1047
    71193:
    ST398NM01_1087
    ECT-R 2:
    ECTR2_945
    ED133:
    SAOV_1034c
    ED98:
    SAAV_1055
    HO 5096 0412:
    SAEMRSA15_09200
    JH1:
    SaurJH1_1172
    JH9:
    SaurJH9_1150
    JKD6008:
    SAA6008_01045 (esaB)
    JKD6159:
    SAA6159_00946 (esaB)
    LGA251:
    SARLGA251_10030
    M013:
    M013TW_1022
    MRSA252:
    SAR1064
    MSHR1132:
    SAMSHR1132_09370
    MSSA476:
    SAS1025
    Mu3:
    SAHV_1082
    Mu50:
    SAV1090
    MW2:
    MW0973
    RF122:
    SAB0956c
    ST398:
    SAPIG1087
    T0131:
    SAT0131_01127
    TCH60:
    HMPREF0772_12142
    TW20:
    SATW20_10850
    USA300_TCH1516:
    USA300HOU_1032
    VC40:
    SAVC_04610

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MAVFKVFYQHNRDEVIVRENTQSLYVEAQTEEQVRRYLKDRNFNIEFITKLEGAHLDYEK
    N315            MAVFKVFYQHNRDEVIVRENTQSLYVEAQTEEQVRRYLKDRNFNIEFITKLEGAHLDYEK
    NCTC8325        MAVFKVFYQHNRDEVIVRENTQSLYVEAQTEEQVRRYLKDRNFNIEFITKLEGAHLDYEK
    USA300_FPR3757  MAVFKVFYQHNRDEVIVRENTQSLYVEAQTEEQVRRYLKDRNFNIEFITKLEGAHLDYEK
                    ************************************************************

    COL             ENSEHFNVEIAK
    N315            ENSEHFNVEIAK
    NCTC8325        ENSEHFNVEIAK
    USA300_FPR3757  ENSEHFNVEIAK
                    ************