Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN003356000
- symbol?: rpmF
- synonym:
- description?: 50S ribosomal protein L32
- 50S ribosomal protein L32
- 50S ribosomalprotein L32p
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3720696..3720827
- synteny block?: BlockID0024400
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1084 (rpmF)
08BA02176:
C248_1154 (rpmF)
11819-97:
MS7_1084 (rpmF)
6850:
RSAU_001012 (rpmF)
71193:
ST398NM01_1124
ECT-R 2:
ECTR2_982 (rpmF)
ED133:
SAOV_1069
ED98:
SAAV_1094 (rpmF)
HO 5096 0412:
SAEMRSA15_09570 (rpmF)
JH1:
SaurJH1_1209 (rpmF)
JH9:
SaurJH9_1187 (rpmF)
JKD6008:
SAA6008_01082 (rpmF)
JKD6159:
SAA6159_00982 (rpmF)
LGA251:
SARLGA251_10400 (rpmF)
M013:
M013TW_1059
MRSA252:
SAR1101 (rpmF)
MSHR1132:
SAMSHR1132_09740
MSSA476:
SAS1062 (rpmF)
Mu3:
SAHV_1119 (rpmF)
Mu50:
SAV1128 (rpmF)
MW2:
MW1010 (rpmF)
RF122:
SAB0992 (rpmF)
ST398:
SAPIG1124 (rpmF)
T0131:
SAT0131_01166 (hysA)
TCH60:
HMPREF0772_12105 (rpmF)
TW20:
SATW20_11220 (rpmF)
USA300_TCH1516:
—
VC40:
SAVC_04800 (rpmF)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAVPKRRTSKTRKNKRRTHFKISVPGMTECPNCGEYKLSHRVCKNCGSYNGEEVAAK
N315 MAVPKRRTSKTRKNKRRTHFKISVPGMTECPNCGEYKLSHRVCKNCGSYNGEEVAAK
NCTC8325 MAVPKRRTSKTRKNKRRTHFKISVPGMTECPNCGEYKLSHRVCKNCGSYNGEEVAAK
Newman MAVPKRRTSKTRKNKRRTHFKISVPGMTECPNCGEYKLSHRVCKNCGSYNGEEVAAK
USA300_FPR3757 MAVPKRRTSKTRKNKRRTHFKISVPGMTECPNCGEYKLSHRVCKNCGSYNGEEVAAK
*********************************************************