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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003380000
- symbol?: —
- synonym:
- description?: colicin V production protein CvpA
- colicin V production protein CvpA
- bacteriocin production-related protein, putative
- CvpA family protein
- Colicin V production protein
- colicin V production family protein
- membrane protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3741585..3742106
- synteny block?: BlockID0024630
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1098
08BA02176:
C248_1169
11819-97:
MS7_1099
6850:
RSAU_001026
71193:
ST398NM01_1138
ECT-R 2:
ECTR2_996
ED133:
SAOV_1139
ED98:
SAAV_1109
HO 5096 0412:
SAEMRSA15_09720
JH1:
SaurJH1_1223
JH9:
SaurJH9_1201
JKD6008:
SAA6008_01096
JKD6159:
SAA6159_00996
LGA251:
SARLGA251_10540
M013:
M013TW_1075
MRSA252:
SAR1115
MSHR1132:
SAMSHR1132_09880
MSSA476:
SAS1076
Mu3:
SAHV_1133
Mu50:
SAV1142
MW2:
MW1025
RF122:
SAB1006
ST398:
SAPIG1138 (cvpA)
T0131:
SAT0131_01184 (rpsI)
TCH60:
HMPREF0772_12091 (cvpA)
TW20:
SATW20_11360
USA300_TCH1516:
USA300HOU_1077
VC40:
SAVC_04875
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MVIDFIIIIFFVYFVIVGFRRGFWLSMIHLSATIVSLWIASQFYKSIVERLIVFIPYPKT
N315 MVIDFIIIIFFVYFVIVGFRRGFWLSMIHLSATIVSLWIASQFYKSIVERLIVFIPYPKT
NCTC8325 MVIDFIIIIFFVYFVIVGFRRGFWLSMIHLSATIVSLWIASQFYKSIVERLIVFIPYPKT
Newman MVIDFIIIIFFVYFVIVGFRRGFWLSMIHLSATIVSLWIASQFYKSIVERLIVFIPYPKT
USA300_FPR3757 MVIDFIIIIFFVYFVIVGFRRGFWLSMIHLSATIVSLWIASQFYKSIVERLIVFIPYPKT
************************************************************
COL TAFNTTFAFHFNHLQNRFEAIVAFLMITLFCKFILYLIIVTFDKIIAYQNIHIFSRAMGM
N315 TAFNTTFAFHFNHLQNRFEAIVAFLMITLFCKFILYLIIVTFDKIIAYQNIHIFSRAMGM
NCTC8325 TAFNTTFAFHFNHLQNRFEAIVAFLMITLFCKFILYLIIVTFDKIIAYQNIHIFSRAMGM
Newman TAFNTTFAFHFNHLQNRFEAIVAFLMITLFCKFILYLIIVTFDKIIAYQNIHIFSRAMGM
USA300_FPR3757 TAFNTTFAFHFNHLQNRFEAIVAFLMITLFCKFILYLIIVTFDKIIAYQNIHIFSRAMGM
************************************************************
COL IVGVFMTIIVLHFTLYLLALYPNEALQHQLKISIVSHSLIFHIPYLSAFTINL
N315 IVGVFMTIIVLHFTLYLLALYPNEALQHQLKISIVSHSLIFHIPYLSAFTINL
NCTC8325 IVGVFMTIIVLHFTLYLLALYPNEALQHQLKISIVSHSLIFHIPYLSAFTINL
Newman IVGVFMTIIVLHFTLYLLALYPNEALQHQLKISIVSHSLIFHIPYLSAFTINL
USA300_FPR3757 IVGVFMTIIVLHFTLYLLALYPNEALQHQLKISIVSHSLIFHIPYLSAFTINL
*****************************************************