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Summary[edit source | edit]

  • pan ID?: SAUPAN003383000
  • symbol?: trxA
  • description?: thioredoxin
  • strand?: +
  • coordinates?: 3746419..3746742
  • synteny block?: BlockID0024660
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1155 (trxA)
    N315:
    SA0992 (trxA)
    NCTC8325:
    Newman:
    NWMN_1057 (trxA)
    USA300_FPR3757:
    04-02981:
    SA2981_1101 (trxA)
    08BA02176:
    C248_1172 (trxA)
    11819-97:
    MS7_1102 (trxA)
    71193:
    ST398NM01_1141
    ECT-R 2:
    ECTR2_999 (trx)
    ED133:
    SAOV_1142 (trxA)
    ED98:
    SAAV_1112 (trxA)
    HO 5096 0412:
    SAEMRSA15_09750 (trxA)
    JH1:
    SaurJH1_1226
    JH9:
    SaurJH9_1204
    JKD6008:
    SAA6008_01099 (trxA)
    JKD6159:
    SAA6159_00999 (trxA)
    LGA251:
    SARLGA251_10570 (trxA)
    M013:
    M013TW_1078
    MRSA252:
    SAR1118 (trxA)
    MSHR1132:
    SAMSHR1132_09910
    MSSA476:
    SAS1079
    Mu3:
    SAHV_1136 (trxA)
    Mu50:
    SAV1145 (trxA)
    MW2:
    MW1028 (trxA)
    RF122:
    SAB1009 (trxA)
    ST398:
    SAPIG1141 (trx)
    T0131:
    SAT0131_01187
    TCH60:
    HMPREF0772_12088 (trxA)
    TW20:
    SATW20_11390 (trxA)
    USA300_TCH1516:
    USA300HOU_1080 (trxA)
    VC40:
    SAVC_04890

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDEN
    N315            MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDEN
    NCTC8325        MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDEN
    Newman          MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDEN
    USA300_FPR3757  MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDEN
                    ************************************************************

    COL             PSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
    N315            PSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
    NCTC8325        PSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
    Newman          PSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
    USA300_FPR3757  PSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
                    ********************************************