PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003405000
• symbol^?: scc
• synonym:
• description^?: fibrinogen-binding protein

  descriptions from strain specific annotations:

  • fibrinogen-binding protein
  • complement inhibitor SCIN family protein
  • fibrinogen-binding protein precursor-like protein
  • Staphylococcal complement inhibitor SCIN-like protein
  • fibrinogen-binding protein precursor-related protein
  • Involved in expression of fibrinogen binding protein
  • staphylococcal complement inhibitor (SCIN)
• strand^?: +
• coordinates^?: 3760783..3761133
• synteny block^?: BlockID0024860
• occurrence^?: in 97% of 33 strains

⊟Orthologs

COL:
SACOL1169
N315:
SA1004
NCTC8325:
SAOUHSC_01115
Newman:
NWMN_1070
USA300_FPR3757:
SAUSA300_1056
04-02981:
SA2981_1115
08BA02176:
C248_1187
11819-97:
MS7_1115
6850:
RSAU_001041
71193:
ST398NM01_1155
ECT-R 2:
ECTR2_1013
ED133:
SAOV_1156
ED98:
SAAV_1127
HO 5096 0412:
SAEMRSA15_09900
JH1:
SaurJH1_1240
JH9:
SaurJH9_1216
JKD6008:
SAA6008_01112 (scc)
JKD6159:
SAA6159_01011 (scc)
LGA251:
SARLGA251_10690 (scc)
M013:
M013TW_1091
MRSA252:
SAR1131
MSHR1132:
—
MSSA476:
SAS1092
Mu3:
SAHV_1149
Mu50:
SAV1159
MW2:
MW1041
RF122:
SAB1022
ST398:
SAPIG1155
T0131:
SAT0131_01202 (rpmD)
TCH60:
HMPREF0772_12075
TW20:
SATW20_11510 (scc)
USA300_TCH1516:
USA300HOU_1095
VC40:
SAVC_04950

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKFKKYILTGTLALLLSSTGIATIEGNKADASSLDKYLTESQFHDKRIAEELRTLLNKSN
  N315            MKFKKYILTGTLALLLSSTGIATIEGNKADASSLDKYLTESQFHDKRIAEELRTLLNKSN
  NCTC8325        MKFKKYILTGTLALLLSSTGIATIEGNKADASSLDKYLTESQFHDKRIAEELRTLLNKSN
  Newman          MKFKKYILTGTLALLLSSTGIATIEGNKADASSLDKYLTESQFHDKRIAEELRTLLNKSN
  USA300_FPR3757  MKFKKYILTGTLALLLSSTGIATIEGNKADASSLDKYLTESQFHDKRIAEELRTLLNKSN
                  ************************************************************
  
  COL             VYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR
  N315            VYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR
  NCTC8325        VYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR
  Newman          VYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR
  USA300_FPR3757  VYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR
                  ********************************************************