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Summary[edit source | edit]

  • pan ID?: SAUPAN003457000
  • symbol?:
  • description?: multicopper polyphenol oxidase

      descriptions from strain specific annotations:

    • multicopper polyphenol oxidase
    • multi-copper polyphenol oxidoreductase laccase
  • strand?: +
  • coordinates?: 3803016..3803809
  • synteny block?: BlockID0025370
  • occurrence?: in 97% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1145
    08BA02176:
    C248_1216
    11819-97:
    MS7_1144
    71193:
    ST398NM01_1184
    ECT-R 2:
    ECTR2_1043
    ED133:
    SAOV_1188
    ED98:
    SAAV_1158
    HO 5096 0412:
    SAEMRSA15_10200
    JH1:
    SaurJH1_1271
    JH9:
    SaurJH9_1246
    JKD6008:
    SAA6008_01141
    JKD6159:
    SAA6159_01038
    LGA251:
    SARLGA251_10980
    M013:
    M013TW_1121
    MRSA252:
    SAR1163
    MSHR1132:
    SAMSHR1132_10290
    MSSA476:
    SAS1121
    Mu3:
    SAHV_1177
    Mu50:
    SAV1187
    MW2:
    MW1070
    RF122:
    SAB1051
    ST398:
    SAPIG1184
    T0131:
    SAT0131_01234
    TCH60:
    HMPREF0772_12045
    TW20:
    SATW20_11810
    USA300_TCH1516:
    VC40:
    SAVC_05100

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMARYIDDRPYNITQHQLQ
    N315            MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMARYIDDRPYNITQHQLQ
    NCTC8325        ------------------------------------------MARYIDDRPYNITQHQLQ
    Newman          MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMARYIDDRPYNITQHQLQ
    USA300_FPR3757  ------------------------------------------MARYIDDRPYNITQHQLQ
                                                              ******************

    COL             LAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMC
    N315            LAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMC
    NCTC8325        LAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMC
    Newman          LAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMC
    USA300_FPR3757  LAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMC
                    ************************************************************

    COL             YADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEI
    N315            YADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEI
    NCTC8325        YADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEI
    Newman          YADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEI
    USA300_FPR3757  YADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEI
                    ************************************************************

    COL             NDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAALLIYYGVPKENIYTTAYATSEHL
    N315            NDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAELLNYYGVPKENIYTTAYATSEHL
    NCTC8325        NDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAALLIYYGVPKENIYTTAYATSEHL
    Newman          NDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAALLIYYGVPKENIYTTAYATSEHL
    USA300_FPR3757  NDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAALLIYYGVPKENIYTTAYATSEHL
                    ************************************ ** ********************

    COL             ELFFSYRLEKGQTGRMLAFIGQQ
    N315            ELFFSYRLEKGQTGRMLAFIGQQ
    NCTC8325        ELFFSYRLEKGQTGRMLAFIGQQ
    Newman          ELFFSYRLEKGQTGRMLAFIGQQ
    USA300_FPR3757  ELFFSYRLEKGQTGRMLAFIGQQ
                    ***********************