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Summary[edit source | edit]

  • pan ID?: SAUPAN003559000
  • symbol?: frr
  • description?: ribosome recycling factor

      descriptions from strain specific annotations:

    • ribosome recycling factor
    • ribosome Recycling Factor (RRF)
  • strand?: +
  • coordinates?: 3893698..3894252
  • synteny block?: BlockID0026360
  • occurrence?: in 97% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1278 (frr)
    N315:
    SA1102 (frr)
    NCTC8325:
    Newman:
    NWMN_1169 (frr)
    USA300_FPR3757:
    04-02981:
    SA2981_1217 (frr)
    08BA02176:
    C248_1292 (frr)
    11819-97:
    MS7_1217 (frr)
    71193:
    ST398NM01_1261
    ECT-R 2:
    ECTR2_1115 (frr)
    ED133:
    SAOV_1261
    ED98:
    SAAV_1234 (frr)
    HO 5096 0412:
    SAEMRSA15_10920 (frr)
    JH1:
    SaurJH1_1345 (frr)
    JH9:
    SaurJH9_1319 (frr)
    JKD6008:
    SAA6008_01214 (frr)
    JKD6159:
    SAA6159_01114 (frr)
    LGA251:
    SARLGA251_11700 (frr)
    M013:
    M013TW_1199
    MRSA252:
    SAR1235 (frr)
    MSHR1132:
    SAMSHR1132_11020
    MSSA476:
    SAS1193 (frr)
    Mu3:
    SAHV_1249 (frr)
    Mu50:
    SAV1259 (frr)
    MW2:
    MW1142 (frr)
    RF122:
    SAB1121 (frr)
    ST398:
    SAPIG1261 (frr)
    T0131:
    SAT0131_01312
    TCH60:
    HMPREF0772_11971 (frr)
    TW20:
    SATW20_12530 (frr)
    USA300_TCH1516:
    VC40:
    SAVC_05460 (frr)

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPE
    N315            MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPE
    NCTC8325        MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPE
    Newman          MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPE
    USA300_FPR3757  MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPE
                    ************************************************************

    COL             ARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIG
    N315            ARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIG
    NCTC8325        ARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIG
    Newman          ARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIG
    USA300_FPR3757  ARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIG
                    ************************************************************

    COL             EEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKD
    N315            EEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKD
    NCTC8325        EEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKD
    Newman          EEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKD
    USA300_FPR3757  EEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKD
                    ************************************************************

    COL             IMSV
    N315            IMSV
    NCTC8325        IMSV
    Newman          IMSV
    USA300_FPR3757  IMSV
                    ****