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Summary[edit source | edit]

  • pan ID?: SAUPAN003564000
  • symbol?: proS
  • description?: prolyl-tRNA synthetase

      descriptions from strain specific annotations:

    • prolyl-tRNA synthetase
    • proline--tRNA ligase
  • strand?: +
  • coordinates?: 3897764..3899467
  • synteny block?: BlockID0026410
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1282 (proS)
    N315:
    SA1106 (proS)
    NCTC8325:
    Newman:
    NWMN_1173 (proS)
    USA300_FPR3757:
    04-02981:
    SA2981_1221 (proS)
    08BA02176:
    C248_1296 (proS)
    11819-97:
    MS7_1221 (proS)
    71193:
    ST398NM01_1265
    ECT-R 2:
    ECTR2_1119 (proS)
    ED133:
    SAOV_1265
    ED98:
    SAAV_1238 (proS)
    HO 5096 0412:
    SAEMRSA15_10960 (proS)
    JH1:
    SaurJH1_1349
    JH9:
    SaurJH9_1323
    JKD6008:
    SAA6008_01218 (proS)
    JKD6159:
    SAA6159_01118 (proS)
    LGA251:
    SARLGA251_11740 (proS)
    M013:
    M013TW_1203
    MRSA252:
    SAR1239 (proS)
    MSHR1132:
    SAMSHR1132_11060
    MSSA476:
    SAS1197
    Mu3:
    SAHV_1253 (proS)
    Mu50:
    SAV1263 (proS)
    MW2:
    MW1146 (proS)
    RF122:
    SAB1125 (proS)
    ST398:
    SAPIG1265 (proS)
    T0131:
    SAT0131_01316
    TCH60:
    HMPREF0772_11966 (proS)
    TW20:
    SATW20_12570 (proS)
    USA300_TCH1516:
    USA300HOU_1195 (proS)
    VC40:
    SAVC_05480

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE
    N315            MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE
    NCTC8325        MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE
    Newman          MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE
    USA300_FPR3757  MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE
                    ************************************************************

    COL             MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN
    N315            MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN
    NCTC8325        MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN
    Newman          MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN
    USA300_FPR3757  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN
                    ************************************************************

    COL             ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA
    N315            ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA
    NCTC8325        ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA
    Newman          ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA
    USA300_FPR3757  ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA
                    ************************************************************

    COL             YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVY
    N315            YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVY
    NCTC8325        YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVY
    Newman          YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVY
    USA300_FPR3757  YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVY
                    ************************************************************

    COL             EPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEI
    N315            EPNHKHSTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEI
    NCTC8325        EPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEI
    Newman          EPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEI
    USA300_FPR3757  EPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEI
                    ******:*****************************************************

    COL             NDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGAN
    N315            NDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGAN
    NCTC8325        NDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGAN
    Newman          NDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGAN
    USA300_FPR3757  NDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGAN
                    ************************************************************

    COL             EDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGAAHFAEGIEVGQVFKLGTKYSES
    N315            EDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSES
    NCTC8325        EDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSES
    Newman          EDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSES
    USA300_FPR3757  EDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSES
                    *************************************.**********************

    COL             MNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPK
    N315            MNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPK
    NCTC8325        MNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPK
    Newman          MNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPK
    USA300_FPR3757  MNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPK
                    *************.**********************************************

    COL             KDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVK
    N315            KDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVK
    NCTC8325        KDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVK
    Newman          KDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVK
    USA300_FPR3757  KDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVK
                    ************************************************************

    COL             ERLTGDSEEVHIDDLMTVITNKYDNLK
    N315            ERLTGDSEEVHIDDLMTVITNKYDNLK
    NCTC8325        ERLTGDSEEVHIDDLMTVITNKYDNLK
    Newman          ERLTGDSEEVHIDDLMTVITNKYDNLK
    USA300_FPR3757  ERLTGDSEEVHIDDLMTVITNKYDNLK
                    ***************************