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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003573000
- symbol?: ribC
- synonym:
- description?: riboflavin biosynthesis protein RibF
- riboflavin biosynthesis protein RibF
- bifunctional riboflavin kinase/FMN adenylyltransferase
- bifunctional riboflavin kinase and FMN adenylyltransferase
- riboflavin kinase / FAD synthase ribC
- Riboflavin kinase / FMN adenylyltransferase
- bifunctional protein including riboflavin kinase and FAD synthase
- bifunctional riboflavin kinase/FAD synthase RibC
- putative riboflavin biosynthesis diaminohydroxyphosphoribosylaminopyrimidine deaminase
- riboflavin biosynthesis diaminohydroxyphosphoribosylaminopyrimidine deaminase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3910671..3911642
- synteny block?: BlockID0026500
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1230 (ribC)
08BA02176:
C248_1305
11819-97:
MS7_1230 (ribF)
6850:
RSAU_001155 (ribCF)
71193:
ST398NM01_1274
ECT-R 2:
ECTR2_1128 (ribF)
ED133:
SAOV_1274 (ribC)
ED98:
SAAV_1247 (ribF)
HO 5096 0412:
SAEMRSA15_11050
JH1:
SaurJH1_1358
JH9:
SaurJH9_1332
JKD6008:
SAA6008_01227 (ribC)
JKD6159:
SAA6159_01127 (ribC)
LGA251:
SARLGA251_11830
M013:
M013TW_1212
MRSA252:
SAR1248
MSHR1132:
SAMSHR1132_11150
MSSA476:
SAS1206
Mu3:
SAHV_1262 (ribC)
Mu50:
SAV1272 (ribC)
MW2:
MW1155 (ribC)
RF122:
SAB1134 (ribC)
ST398:
SAPIG1274 (ribF)
T0131:
SAT0131_01326
TCH60:
HMPREF0772_11957 (ribF)
TW20:
SATW20_12660
USA300_TCH1516:
USA300HOU_1204 (ribC)
VC40:
SAVC_05525
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKVIEVTHPIQSKQYITEDVAMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH
N315 MKVIEVTHPIQSKQYITEDVAMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH
NCTC8325 MKVIEVTHPIQSKQYITEDVAMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH
Newman MKVIEVTHPIQSKQYITEDVAMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH
USA300_FPR3757 MKVIEVTHPIQSKQYITEDVAMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH
************************************************************
COL PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKNNV
N315 PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKNNV
NCTC8325 PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKNNV
Newman PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKNNV
USA300_FPR3757 PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKNNV
************************************************************
COL KEVIAGFDFTFGKFGKGNMTVLQEYDAFNTTIVSKQEIENEKISTTSIRQDLINGELQKA
N315 KEVIAGFDFTFGKFGKGNMTVLQEYDAFNTTIVSKQEIENEKISTTSIRQDLINGELQKA
NCTC8325 KEVIAGFDFTFGKFGKGNMTVLQEYDAFNTTIVSKQEIENEKISTTSIRQDLINGELQKA
Newman KEVIAGFDFTFGKFGKGNMTVLQEYDAFNTTIVSKQEIENEKISTTSIRQDLINGELQKA
USA300_FPR3757 KEVIAGFDFTFGKFGKGNMTVLQEYDAFNTTIVSKQEIENEKISTTSIRQDLINGELQKA
************************************************************
COL NDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTENKLYRG
N315 NDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTENKLYRG
NCTC8325 NDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTENKLYRG
Newman NDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTENKLYRG
USA300_FPR3757 NDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTENKLYRG
************************************************************
COL VANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDPLVKQM
N315 VANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDPLVKQM
NCTC8325 VANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDPLVKQM
Newman VANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDPLVKQM
USA300_FPR3757 VANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDPLVKQM
************************************************************
COL NDDKSRAKYLLAVDFGDEVAYNI
N315 NDDKSRAKYLLAVDFGDEVAYNI
NCTC8325 NDDKSRAKYLLAVDFGDEVAYNI
Newman NDDKSRAKYLLAVDFGDEVAYNI
USA300_FPR3757 NDDKSRAKYLLAVDFGDEVAYNI
***********************