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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003586000
- symbol?: cinA
- synonym:
- description?: competence protein CinA
- competence protein CinA
- competence/damage-inducible protein CinA
- competence-damage inducible protein cinA
- CinA family nicotinamide mononucleotide deamidase-related protein
- competence/damage-inducible protein
- Colligrin
- competence/damage-inducible protein CinA N-domain, putative
- molybdenum cofactor synthesis domain-containing protein
- putative competence-damage inducible protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3925990..3927204
- synteny block?: BlockID0026630
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1242 (cinA)
08BA02176:
C248_1317
11819-97:
MS7_1242
6850:
RSAU_001167 (cinA)
71193:
ST398NM01_1286
ECT-R 2:
ECTR2_1140
ED133:
SAOV_1286 (cinA)
ED98:
SAAV_1259
HO 5096 0412:
SAEMRSA15_11170
JH1:
SaurJH1_1370
JH9:
SaurJH9_1344
JKD6008:
SAA6008_01239 (cinA)
JKD6159:
SAA6159_01139 (cinA)
LGA251:
SARLGA251_11950
M013:
M013TW_1226
MRSA252:
SAR1260
MSHR1132:
SAMSHR1132_11270
MSSA476:
SAS1218
Mu3:
SAHV_1274 (cinA)
Mu50:
SAV1284 (cinA)
MW2:
MW1167 (cinA)
RF122:
SAB1146 (cinA)
ST398:
SAPIG1286
T0131:
SAT0131_01340
TCH60:
HMPREF0772_11944 (cinA)
TW20:
SATW20_12780
USA300_TCH1516:
USA300HOU_1216 (cinA)
VC40:
SAVC_05585
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKY
N315 MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKY
NCTC8325 MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKY
Newman MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKY
USA300_FPR3757 MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKY
************************************************************
COL DTVILTGGLGPTKDDLTKHTVAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALV
N315 DTVILTGGLGPTKDDLTKHTVAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALV
NCTC8325 DTVILTGGLGPTKDDLTKHTVAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALV
Newman DTVILTGGLGPTKDDLTKHTVAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALV
USA300_FPR3757 DTVILTGGLGPTKDDLTKHTVAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALV
************************************************************
COL IEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMVKNELLSHFINHNRIIHSELL
N315 IEGSTVLANHHGMAPGMMVNFENKQIILLPGPPKEMQPMVKNELLSHFINHNRIIHSELL
NCTC8325 IEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMVKNELLSHFINHNRIIHSELL
Newman IEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMVKNELLSHFINHNRIIHSELL
USA300_FPR3757 IEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMVKNELLSHFINHNRIIHSELL
*******:****************************************************
COL RFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
N315 RFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
NCTC8325 RFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
Newman RFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
USA300_FPR3757 RFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
************************************************************
COL LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNE
N315 LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNE
NCTC8325 LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNE
Newman LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNE
USA300_FPR3757 LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNE
************************************************************
COL NFVDINKPIEQQLKDAVQFVNKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSR
N315 NFVDINKPIEQQLKDAVQFVNKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSR
NCTC8325 NFVDINKPIEQQLKDAVQFVNKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSR
Newman NFVDINKPIEQQLKDAVQFVNKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSR
USA300_FPR3757 NFVDINKPIEQQLKDAVQFVNKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSR
************************************************************
COL NLLKNRSQNYALIRLLNWLRTTN
N315 NLLKNRSQNYVLIRLLNWLRTTN
NCTC8325 NLLKNRSQNYALIRLLNWLRTTN
Newman NLLKNRSQNYALIRLLNWLRTTN
USA300_FPR3757 NLLKNRSQNYALIRLLNWLRTTN
**********.************