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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003611000
- symbol?: glpF
- synonym:
- description?: aquaporin family protein
- aquaporin family protein
- glycerol uptake facilitator
- glycerol uptake facilitator protein
- glycerol uptake facilitator protein GlpF
- MIP channel s family protein
- MIP family channel protein
- MIP family glycerol uptake facilitator protein GlpF
- MIP family major intrinsic protein channel protein
- putative glycerol uptake facilitator protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3951526..3952344
- synteny block?: BlockID0026820
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1256 (glpF)
08BA02176:
C248_1333 (glpF)
11819-97:
MS7_1256
6850:
RSAU_001182 (glpF)
71193:
ST398NM01_1301
ECT-R 2:
ECTR2_1156
ED133:
SAOV_1300 (glpF)
ED98:
SAAV_1273 (glpF)
HO 5096 0412:
SAEMRSA15_11330 (glpF)
JH1:
SaurJH1_1384
JH9:
SaurJH9_1358
JKD6008:
SAA6008_01253 (glpF)
JKD6159:
SAA6159_01153 (glpF)
LGA251:
SARLGA251_12090 (glpF)
M013:
M013TW_1240
MRSA252:
SAR1274 (glpF)
MSHR1132:
SAMSHR1132_11410
MSSA476:
SAS1232
Mu3:
SAHV_1289 (glpF)
Mu50:
SAV1300 (glpF)
MW2:
MW1182 (glpF)
RF122:
SAB1160 (glpF)
ST398:
SAPIG1301
T0131:
SAT0131_01354
TCH60:
HMPREF0772_11928 (glpF)
TW20:
SATW20_12920 (glpF)
USA300_TCH1516:
USA300HOU_1230 (glpF)
VC40:
SAVC_05690
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNVYLAEFLGTAILILFGGGVCANVNLKRSAANGADWIVITAGWGLAVTMGVFAVGQFSG
N315 MNVYLAEFLGTAILILFGGGVCANVNLKRSAANGADWIVITAGWGLAVTMGVFAVGQFSG
NCTC8325 MNVYLAEFLGTAILILFGGGVCANVNLKRSAANGADWIVITAGWGLAVTMGVFAVGQFSG
Newman MNVYLAEFLGTAILILFGGGVCANVNLKRSAANGADWIVITAGWGLAVTMGVFAVGQFSG
USA300_FPR3757 MNVYLAEFLGTAILILFGGGVCANVNLKRSAANGADWIVITAGWGLAVTMGVFAVGQFSG
************************************************************
COL AHLNPAVSLALALDGSFDWSLVPGYIVAQMLGAIVGATIVWLMYLPHWKATEEAGAKLGV
N315 AHLNPAVSLALALDGSFDWSLVPGYIVAQMLGAIVGATIVWLMYLPHWKATEEAGAKLGV
NCTC8325 AHLNPAVSLALALDGSFDWSLVPGYIVAQMLGAIVGATIVWLMYLPHWKATEEAGAKLGV
Newman AHLNPAVSLALALDGSFDWSLVPGYIVAQMLGAIVGATIVWLMYLPHWKATEEAGAKLGV
USA300_FPR3757 AHLNPAVSLALALDGSFDWSLVPGYIVAQMLGAIVGATIVWLMYLPHWKATEEAGAKLGV
************************************************************
COL FSTAPAIKNYFANFLSEIIGTMALTLGILFIGVNKIADGLNPLIVGALIVAIGLSLGGAT
N315 FSTAPAIKNYFANFLSEIIGTMALTLGILFIGVNKIADGLNPLIVGALIVAIGLSLGGAT
NCTC8325 FSTAPAIKNYFANFLSEIIGTMALTLGILFIGVNKIADGLNPLIVGALIVAIGLSLGGAT
Newman FSTAPAIKNYFANFLSEIIGTMALTLGILFIGVNKIADGLNPLIVGALIVAIGLSLGGAT
USA300_FPR3757 FSTAPAIKNYFANFLSEIIGTMALTLGILFIGVNKIADGLNPLIVGALIVAIGLSLGGAT
************************************************************
COL GYAINPARDLGPRIAHAILPIAGKGGSNWSYAIVPILGPIAGGLLGAVVYAVFYKHTFNI
N315 GYAINPARDLGPRIAHAILPIAGKGGSNWSYAIVPILGPIAGGLLGAVVYAVFYKHTFNI
NCTC8325 GYAINPARDLGPRIAHAILPIAGKGGSNWSYAIVPILGPIAGGLLGAVVYAVFYKHTFNI
Newman GYAINPARDLGPRIAHAILPIAGKGGSNWSYAIVPILGPIAGGLLGAVVYAVFYKHTFNI
USA300_FPR3757 GYAINPARDLGPRIAHAILPIAGKGGSNWSYAIVPILGPIAGGLLGAVVYAVFYKHTFNI
************************************************************
COL GCAIAIVVVIITLILGYILNKSSKKGDIESIY
N315 GCAIAIVVVIITLILGYILNKSSKKGDIESIY
NCTC8325 GCAIAIVVVIITLILGYILNKSSKKGDIESIY
Newman GCAIAIVVVIITLILGYILNKSSKKGDIESIY
USA300_FPR3757 GCAIAIVVVIITLILGYILNKSSKKGDIESIY
********************************