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Summary[edit source | edit]

  • pan ID?: SAUPAN003625000
  • symbol?: glnR
  • description?: MerR family transcriptional regulator

      descriptions from strain specific annotations:

    • MerR family transcriptional regulator
    • glutamine synthetase repressor
    • glutamine synthetase
    • FemC, factor involved in methicillin resistance / Glutamine synthetase repressor
    • HTH-type transcriptional regulator glnR
  • strand?: +
  • coordinates?: 3963141..3963509
  • synteny block?: BlockID0026950
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1328 (glnR)
    N315:
    SA1149 (glnR)
    NCTC8325:
    Newman:
    NWMN_1216 (glnR)
    USA300_FPR3757:
    04-02981:
    SA2981_1265 (femC)
    08BA02176:
    C248_1342 (glnR)
    11819-97:
    MS7_1265 (glnR)
    71193:
    ST398NM01_1310
    ECT-R 2:
    ECTR2_1165
    ED133:
    SAOV_1309 (glnR)
    ED98:
    SAAV_1282 (glnR)
    HO 5096 0412:
    SAEMRSA15_11420 (glnR)
    JH1:
    SaurJH1_1393
    JH9:
    SaurJH9_1367
    JKD6008:
    SAA6008_01262 (glnR)
    JKD6159:
    SAA6159_01162 (glnR)
    LGA251:
    SARLGA251_12180 (glnR)
    M013:
    M013TW_1249
    MRSA252:
    SAR1283 (glnR)
    MSHR1132:
    SAMSHR1132_11500
    MSSA476:
    SAS1241
    Mu3:
    SAHV_1298 (glnR)
    Mu50:
    SAV1309 (glnR)
    MW2:
    MW1191 (glnR)
    RF122:
    SAB1171 (glnR)
    ST398:
    SAPIG1310
    T0131:
    SAT0131_01364
    TCH60:
    HMPREF0772_11918 (glnR)
    TW20:
    SATW20_13010 (glnR)
    USA300_TCH1516:
    USA300HOU_1239 (glnR)
    VC40:
    SAVC_05735

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERTEGQKRLFSLNDLERLL
    N315            MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERTEGQKRLFSLNDLERLL
    NCTC8325        MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERTEGQKRLFSLNDLERLL
    Newman          MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERTEGQKRLFSLNDLERLL
    USA300_FPR3757  MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERTEGQKRLFSLNDLERLL
                    ************************************************************

    COL             EIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDATQKPIGETLPINRGDLSRF
    N315            EIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDATQKPIGETLPINRGDLSRF
    NCTC8325        EIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDATQKPIGETLPINRGDLSRF
    Newman          EIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDATQKPIGETLPINRGDLSRF
    USA300_FPR3757  EIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDATQKPIGETLPINRGDLSRF
                    ************************************************************

    COL             IK
    N315            IK
    NCTC8325        IK
    Newman          IK
    USA300_FPR3757  IK
                    **