Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN003703000
- symbol?: —
- synonym:
- description?: HAD family phosphatase
- HAD family phosphatase
- HAD superfamily hydrolase
- Cof-type HAD-IIB family hydrolase
- haloacid dehalogenase-like hydrolase
- hydrolase, haloacid dehalogenase-like family
- cof family hydrolase
- cof-like hydrolase family protein
- Hydrolase (HAD superfamily)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4007675..4008478
- synteny block?: BlockID0027690
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1286
08BA02176:
C248_1366
11819-97:
MS7_1290
6850:
RSAU_001213
71193:
ST398NM01_1333
ECT-R 2:
ECTR2_1190
ED133:
SAOV_1344
ED98:
SAAV_1311
HO 5096 0412:
SAEMRSA15_11780
JH1:
SaurJH1_1419
JH9:
SaurJH9_1392
JKD6008:
SAA6008_01297
JKD6159:
SAA6159_01198
LGA251:
SARLGA251_12400
M013:
M013TW_1279
MRSA252:
SAR1341
MSHR1132:
SAMSHR1132_11760
MSSA476:
SAS1271
Mu3:
SAHV_1320
Mu50:
SAV1331
MW2:
MW1218
RF122:
SAB1189
ST398:
SAPIG1333
T0131:
SAT0131_01402
TCH60:
HMPREF0772_11877
TW20:
SATW20_13330
USA300_TCH1516:
USA300HOU_1276
VC40:
SAVC_05895
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLASGRPTEGMIPTARDLKL
N315 MTNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLASGRPTEGMIPTARDLKL
NCTC8325 MTNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLASGRPTEGMIPTARDLKL
Newman MTNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLASGRPTEGMIPTARDLKL
USA300_FPR3757 MTNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLASGRPTEGMIPTARDLKL
************************************************************
COL PEHHSYIISYNGSKTINMTNEEVEVSKSIGKQDFDEIVDYCRDRGFFVLTYHDGQIIYDS
N315 PEHHSYIISYNGSKTINMTNEEVEVSKSIGKQDFDEIVDYCRDRGFFVLTYHDGQIIYDS
NCTC8325 PEHHSYIISYNGSKTINMTNEEVEVSKSIGKQDFDEIVDYCRDRGFFVLTYHDGQIIYDS
Newman PEHHSYIISYNGSKTINMTNEEVEVSKSIGKQDFDEIVDYCRDRGFFVLTYHDGQIIYDS
USA300_FPR3757 PEHHSYIISYNGSKTINMTNEEVEVSKSIGKQDFDEIVDYCRDRGFFVLTYHDGQIIYDS
************************************************************
COL EHEYMNIEAELTGLPMKRVDDIKAYIQGDVPKVMGVDYVANITEARIDLNGVFNDNVDAT
N315 EHEYMNIEAELTGLPMKRVDDIKAYIQGDVPKVMGVDYVANITEARIDLNGVFNDNVDAT
NCTC8325 EHEYMNIEAELTGLPMKRVDDIKAYIQGDVPKVMGVDYVANITEARIDLNGVFNDNVDAT
Newman EHEYMNIEAELTGLPMKRVDDIKAYIQGDVPKVMGVDYVANITEARIDLNGVFNDNVDAT
USA300_FPR3757 EHEYMNIEAELTGLPMKRVDDIKAYIQGDVPKVMGVDYVANITEARIDLNGVFNDNVDAT
************************************************************
COL TSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFGDSMNDKSMFEVAGLAIAMGNAS
N315 TSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFGDSMNDKSMFEVAGLAIAMGNAS
NCTC8325 TSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFGDSMNDKSMFEVAGLAIAMGNAS
Newman TSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFGDSMNDKSMFEVAGLAIAMGNAS
USA300_FPR3757 TSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFGDSMNDKSMFEVAGLAIAMGNAS
************************************************************
COL DELKQYANEVTLDHNENGIPHALKKLL
N315 DELKQYADEVTLDHNENGIPHALKKLL
NCTC8325 DELKQYANEVTLDHNENGIPHALKKLL
Newman DELKQYANEVTLDHNENGIPHALKKLL
USA300_FPR3757 DELKQYANEVTLDHNENGIPHALKKLL
*******:*******************