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Summary[edit source | edit]

  • pan ID?: SAUPAN003756000
  • symbol?: dmpI
  • description?: 4-oxalocrotonate tautomerase

      descriptions from strain specific annotations:

    • 4-oxalocrotonate tautomerase
    • putative tautomerase ywhB
  • strand?: -
  • coordinates?: 4055271..4055456
  • synteny block?: BlockID0028190
  • occurrence?: in 94% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1399 (dmpI)
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1317
    08BA02176:
    C248_1401
    11819-97:
    MS7_1320 (ywhB)
    71193:
    ST398NM01_1364
    ECT-R 2:
    ECTR2_1220 (dmpI)
    ED133:
    ED98:
    SAAV_1343 (dmpI)
    HO 5096 0412:
    SAEMRSA15_12110
    JH1:
    SaurJH1_1453
    JH9:
    SaurJH9_1424
    JKD6008:
    SAA6008_01328
    JKD6159:
    SAA6159_01228
    LGA251:
    SARLGA251_12720
    M013:
    M013TW_1309
    MRSA252:
    SAR1376
    MSHR1132:
    SAMSHR1132_12060
    MSSA476:
    SAS1303
    Mu3:
    SAHV_1351 (graC)
    Mu50:
    SAV1363
    MW2:
    MW1250
    RF122:
    ST398:
    SAPIG1364
    T0131:
    SAT0131_01435
    TCH60:
    HMPREF0772_11844
    TW20:
    SATW20_13630
    USA300_TCH1516:
    USA300HOU_1298
    VC40:
    SAVC_06065

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             -MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKS
    N315            MMPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKS
    NCTC8325        -MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKS
    Newman          MMPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKS
    USA300_FPR3757  -MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKS
                     ***********************************************************

    COL             DQ
    N315            DQ
    NCTC8325        DQ
    Newman          DQ
    USA300_FPR3757  DQ
                    **