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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003811000
- symbol?: dapI
- synonym:
- description?: hydrolase
- hydrolase
- hippurate hydrolase
- amidohydrolase
- M20/M25/M40 family peptidase
- peptidase, M20 family
- amidohydrolase family protein
- M20D subfamily hippurate hydrolase
- N-acetyldiaminopimelate deacetylase
- N-acetyl-L,L-diaminopimelate deacetylase
- putative peptidase
- putative zinc peptidase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4101927..4103087
- synteny block?: BlockID0028680
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1352
08BA02176:
C248_1437
11819-97:
MS7_1354
6850:
RSAU_001277
71193:
ST398NM01_1399
ECT-R 2:
ECTR2_1255
ED133:
SAOV_1407
ED98:
SAAV_1381
HO 5096 0412:
SAEMRSA15_12610
JH1:
SaurJH1_1488
JH9:
SaurJH9_1459
JKD6008:
SAA6008_01362
JKD6159:
SAA6159_01264
LGA251:
SARLGA251_13140
M013:
M013TW_1342
MRSA252:
SAR1410
MSHR1132:
SAMSHR1132_12390
MSSA476:
SAS1339
Mu3:
SAHV_1386
Mu50:
SAV1398
MW2:
MW1286
RF122:
SAB1253
ST398:
SAPIG1399
T0131:
SAT0131_01473
TCH60:
HMPREF0772_11811
TW20:
SATW20_13970
USA300_TCH1516:
USA300HOU_1333
VC40:
SAVC_06235
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNELEFVTKHRRHLHQHPELSLHEFETTAYIKAFLDSLNIKYDCPLETGVIAYLEGNGSH
N315 MNELEFVTKHRRHLHQHPELSLHEFETTAYIKAFLDSLNIKYDCPLETGVIAYLEGNGSH
NCTC8325 MNELEFVTKHRRHLHQHPELSLHEFETTAYIKAFLDSLNIKYDCPLETGVIAYLEGNGSH
Newman MNELEFVTKHRRHLHQHPELSLHEFETTAYIKAFLDSLNIKYDCPLETGVIAYLEGNGSH
USA300_FPR3757 MNELEFVTKHRRHLHQHPELSLHEFETTAYIKAFLDSLNIKYDCPLETGVIAYLEGNGSH
************************************************************
COL TIAYRADIDALPILEENDVPYRSQSDHVMHACGHDGHTTALMLFVQRCKDMQDAGQLPQN
N315 TIAYRADIDALPILEENDVPYRSQSDHVMHACGHDGHTTALMLFVQRCKDMQDAGQLPQN
NCTC8325 TIAYRADIDALPILEENDVPYRSQSDHVMHACGHDGHTTALMLFVQRCKDMQDAGQLPQN
Newman TIAYRADIDALPILEENDVPYRSQSDHVMHACGHDGHTTALMLFVQRCKDMQDAGQLPQN
USA300_FPR3757 TIAYRADIDALPILEENDVPYRSQSDHVMHACGHDGHTTALMLFVQRCKDMQDAGQLPQN
************************************************************
COL VVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEY
N315 VVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEY
NCTC8325 VVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEY
Newman VVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEY
USA300_FPR3757 VVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEY
************************************************************
COL RFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINT
N315 RFFLTGLSSHVADKEQAHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINT
NCTC8325 RFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINT
Newman RFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINT
USA300_FPR3757 RFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINT
****************.*******************************************
COL VPSNGYLEGTIRTYDIDDLTIVKNQMHKIAESVKLLFNVDCEVKFAEGYPPTINSPKLRT
N315 VPSNGYLEGTIRTYDIDDLTIVKNQMHKIAESVKLLFNVECEVKFAEGYPPTINSPKLRT
NCTC8325 VPSNGYLEGTIRTYDIDDLTIVKNQMHKIAESVKLLFNVDCEVKFAEGYPPTINSPKLRT
Newman VPSNGYLEGTIRTYDIDDLTIVKNQMHKIAESVKLLFNVDCEVKFAEGYPPTINSPKLRT
USA300_FPR3757 VPSNGYLEGTIRTYDIDDLTIVKNQMHKIAESVKLLFNVDCEVKFAEGYPPTINSPKLRT
***************************************:********************
COL QIEDALIKADLNVYDKPTPFLFGEDFSFYGQQLAPAYFVFIGTRNEDKGFVTGLHTSHLN
N315 QIEDALIKADLNVYDKPTPFLFGEDFSFYGQQLAPAYFVFIGTRNEDKGFVTGLHTSHLN
NCTC8325 QIEDALIKADLNVYDKPTPFLFGEDFSFYGQQLAPAYFVFIGTRNEDKGFVTGLHTSHLN
Newman QIEDALIKADLNVYDKPTPFLFGEDFSFYGQQLAPAYFVFIGTRNEDKGFVTGLHTSHLN
USA300_FPR3757 QIEDALIKADLNVYDKPTPFLFGEDFSFYGQQLAPAYFVFIGTRNEDKGFVTGLHTSHLN
************************************************************
COL FDEKVLINVINFYENLLNNYKEV
N315 FDEKALINVVNFYENLLNNYKEV
NCTC8325 FDEKVLINVVNFYENLLNNYKEV
Newman FDEKVLINVVNFYENLLNNYKEV
USA300_FPR3757 FDEKVLINVVNFYENLLNNYKEV
****.****:*************